Pseudomonas palleroniana: LDL65_08790
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Entry
LDL65_08790 CDS
T09728
Symbol
dgcB
Name
(GenBank) dimethylglycine demethylation protein DgcB
KO
K21834
N,N-dimethylglycine/sarcosine dehydrogenase ferredoxin subunit
Organism
ppae
Pseudomonas palleroniana
Pathway
ppae00260
Glycine, serine and threonine metabolism
ppae01100
Metabolic pathways
Module
ppae_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
ppae00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LDL65_08790 (dgcB)
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Gene cluster
GFIT
Motif
Pfam:
DUF3483
CCG
Fer4_8
Fer4_10
Fer4_9
Fer4_17
Fer4_16
Fer4_6
Fer4_2
Fer4
Fer4_4
Fer4_7
Fer4_21
OPT
Fer4_22
Fer4_3
Motif
Other DBs
NCBI-ProteinID:
UOP12626
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Position
complement(1868729..1870672)
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AA seq
647 aa
AA seq
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MLNTLLPILLFAALGLAVLGALRRVNMWRRGRASKVDLLGGLLAMPKRYMVDLHHVVARD
KYIANTHVATALGFVLSALLAILVHGFGLQSRILGYALLLASVLMFVGATFVYLRRRNPP
SRLSKGPWMRLPKSLMAFSVSFFLVTLPVAGILPADFGGWLLAAILSVGVLWGVSEMFFG
MTWGGPMKHAFAGALHLAWHRRAERFGGGRSTGLKPLDLRDKTAPLGVEKPKDFTWNQLL
GFDACVQCGKCEAACPAFAAGQPLNPKKLIQDMVVGLAGGTDAKFAGSPYPGKAIGEHGG
NPHQPIVNGLVDAETLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLEKGATPNKGAEV
LENLIATDNPGGFAPGGRLNWAADLNLPLLSDMGSCEVLFWVGDGAFDMRNQRTLRAFVK
VLKAAKVDFAVLGLEERDSGDVARRLGDEATFQLLATRNIQTLAKYTFKRIVTCDPHSFH
VLKNEYGAFNGNYLVQHHSTFMAELIGEGALNLGQHKGNSVTYHDPCYLGRYNGEYEAPR
QVLRALGIEVKEMQRSGFRSRCCGGGGGAPITDIPGKQRIPDMRMEDIRETGAELVAVGC
PQCTAMLEGVVEPRPLIKDIAELVADALLEDAAPAKAPLKREPAEVH
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaccttgctgcctatcctgttatttgccgctctgggcctcgcggtcctcggc
gccctgcgccgggtgaacatgtggcgccgtggtcgtgcctcgaaagtcgacctgctgggc
ggcctgctggccatgcccaagcgctacatggtcgacctgcaccatgtggtcgcccgcgac
aaatacattgccaacacccacgtcgccacggcgctgggcttcgtgctgtcggcgttgctc
gccatcctggtgcatggtttcggcctgcagagccggatcctgggctacgccttgctgctg
gcctcggtgctgatgtttgttggcgccaccttcgtctacctgcgtcggcgcaacccgccg
tcgcgcctgtcgaaaggcccatggatgcgcctgccgaaaagcctgatggcgttctcggtg
agcttcttcctggtgaccttgccggtggccgggattctgcccgccgacttcggcggctgg
ctgctcgcggcgatcttgagcgtgggggtgctgtggggcgtctcggagatgttcttcggt
atgacctggggcggcccgatgaagcacgcctttgccggcgccctgcacctggcctggcac
cgtcgcgccgaacgcttcggcggcgggcgttcgaccggtttgaaaccgctggacctgcgc
gataaaaccgcgcccctgggtgtggaaaaacccaaggatttcacctggaaccaactgctc
ggcttcgacgcctgcgtgcaatgcggcaagtgcgaggccgcctgcccggcctttgccgcc
ggccagccgctgaacccgaaaaaactcattcaagacatggtggtcggcctggccggcggc
accgatgccaagtttgccggcagcccgtatccaggcaaagccatcggcgagcatggcggc
aacccgcatcagccgatcgtcaacggcctggtggacgccgagaccttgtggtcgtgcacc
acttgtcgtgcgtgcgtggaagagtgcccgatgatgatcgagcacgtggacgccatcgtc
gacatgcgccgccacctgacgctggaaaaaggtgccacgccgaacaaaggtgccgaagtc
ctggaaaacctgatcgccaccgacaaccccggcggtttcgcaccgggtggccggttgaac
tgggcggcggacctgaacctgccgttgctcagtgacatgggcagttgcgaggtgctgttc
tgggtcggtgatggcgctttcgacatgcgcaaccaacgcaccctgcgcgccttcgtcaaa
gtcctcaaggccgccaaggtcgacttcgccgtactcggcctggaagaacgtgacagcggt
gatgtggcacgccgcctgggcgatgaagcgaccttccagctgctggccacgcgcaacatc
cagaccctggccaaatacaccttcaagcgcatcgtcacctgcgacccgcacagtttccat
gtgctgaaaaacgaatatggcgccttcaacggtaactacctcgtgcagcaccacagcacc
ttcatggccgagctgatcggcgagggcgcgctgaacctgggccagcacaagggcaacagc
gtgacctaccacgacccttgttacctgggccgctacaacggcgaatacgaagccccgcgc
caggtgctgcgggcgctggggatcgaggtcaaggagatgcaacgctccggtttccgttcg
cgctgctgcggcggcggtggcggcgcgccgatcaccgacattcccggcaagcaacgtatc
ccggatatgcgcatggaagatatccgtgaaactggcgccgaactggtagccgtggggtgc
ccacagtgcacggcgatgcttgaaggggtggtcgagcctcggcccttgatcaaggacatc
gctgaactggtcgccgacgcgttgctcgaagacgccgcaccggccaaagcccccttgaaa
cgtgaacctgcggaggtgcactga
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