Pseudomonas palleroniana: LDL65_09465
Help
Entry
LDL65_09465 CDS
T09728
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ppae
Pseudomonas palleroniana
Pathway
ppae03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LDL65_09465 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppae03400
]
LDL65_09465 (mutM)
Enzymes [BR:
ppae01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
LDL65_09465 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LDL65_09465 (mutM)
DNA repair and recombination proteins [BR:
ppae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LDL65_09465 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DZR
Motif
Other DBs
NCBI-ProteinID:
UOP12752
LinkDB
All DBs
Position
complement(2008071..2008883)
Genome browser
AA seq
270 aa
AA seq
DB search
MPELPEVETTRRGIAPHLEGQRVSRVVVRERRLRWPIPEDLDVRLSGQRIVLVERRAKYL
LINAEVGTLISHLGMSGNLRLVEAGLPAAKHEHVDIELESGLALRYTDPRRFGAMLWSQD
PHNHELLIRLGPEPLTELFDGERLFQLSRGRSMAVKPFIMDNAVVVGVGNIYATEALFAA
GIDPRREAGGISRARYLKLAIEIKRVLAAAIERGGTTLRDFIGGDGQPGYFQQELFVYGR
GGEACKVCGSELRNVVLGQRASVFCPKCQR
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagttaccagaggtcgaaaccacgagacgcggaattgccccgcacctggaaggc
caacgcgtcagccgtgtggtggtgcgtgagcgacgcctgcgctggccgatcccggaggac
ttggacgtgcgcctgtccgggcaacgcatcgtgctggtggagcggcgggccaaatacctg
ctgatcaacgctgaagtgggcaccctgatcagccacctgggcatgtcgggtaacttgcgc
ctggtagaagccggcctgccggcggccaagcatgagcatgtggacattgaactcgaatcc
ggcctggcgctgcgctacaccgacccgcggcgcttcggcgcgatgctgtggagccaggac
ccgcacaatcacgaactgctgatccgcctcggcccggagcctttgaccgagctgttcgat
ggcgagcgcctgttccaactgtcccgtggccgttcgatggcggtgaagccattcatcatg
gacaacgcggtggtggtgggcgtgggcaatatctacgcgacggaagcgctgtttgcggcg
ggcatcgacccgcgtcgagaggccggcggcatttcacgagcgcggtacttgaagctggcg
atcgagatcaagcgcgtgctggcggccgccatcgagcggggcggtaccacgctgcgggac
tttatcggtggtgacggacagccggggtatttccagcaggaactgttcgtctacggccgg
ggaggcgaggcgtgcaaggtctgcgggagcgagttgcgcaatgtggtgctggggcagcgg
gcgagtgtgttttgccccaagtgccagcgctga
DBGET
integrated database retrieval system
