Pseudomonas palleroniana: LDL65_09475
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Entry
LDL65_09475 CDS
T09728
Name
(GenBank) class I SAM-dependent rRNA methyltransferase
KO
K06969
23S rRNA (cytosine1962-C5)-methyltransferase [EC:
2.1.1.191
]
Organism
ppae
Pseudomonas palleroniana
Brite
KEGG Orthology (KO) [BR:
ppae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppae03009
]
LDL65_09475
Enzymes [BR:
ppae01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.191 23S rRNA (cytosine1962-C5)-methyltransferase
LDL65_09475
Ribosome biogenesis [BR:
ppae03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LDL65_09475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltrans_SAM
PUA_3
Cons_hypoth95
Methyltransf_31
Methyltransf_15
MTS
Methyltransf_25
UPF0020
TRM5-TYW2_MTfase
FtsJ
PrmA
Methyltr_RsmB-F
Methyltransf_24
Spermine_synth
TRM
YfdX
Motif
Other DBs
NCBI-ProteinID:
UOP12753
LinkDB
All DBs
Position
2009997..2011193
Genome browser
AA seq
398 aa
AA seq
DB search
MSLPSLRLKANADRRLRNGHLWVYSNEIDVAATPLHGFQAGDQAILEAAGGKTLGIVAMS
PNNLICARLLSRDIKLPLDKSLLVHRLNVALSLRERLFDKPFYRLVYGDSDLLPGLVVDR
FGDILVVQIASATMEAHKDDVIAALTQVLKPSGILFKNDSAARDAEGLNRYVETVFGLVP
EWVALEENGVKFEAPVIQGQKTGWFYDHRMNRARLAPYAKGKRVLDLYSYIGGWGVQAAA
FGASEVFCVDASAFALDGVERNAALNGFAEKMTCIEGDVFEALKELKASEERFDVIVADP
PAFIKRKKDMKNGEGAYRRLNEQAMRLLSKDGILVSASCSMHLPEDDLQNILLTSARHLD
RNIQMLERGGQGPDHPVHPAIAETRYIKSITCRLLPNS
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgccaagcctgcgtctcaaagccaacgccgatcgtcgtttgcgcaacggccac
ctgtgggtctacagcaacgaaatcgacgtggccgccaccccacttcacggcttccaggca
ggcgaccaggccatcctggaagcggccggcggcaaaaccctcggcatcgtggccatgagc
ccgaacaacctgatctgcgcccgcctgctgtcgcgcgacatcaagttgccgctggacaag
tcgctgctggtacaccgcctgaacgtcgccctgtccctgcgtgagcgcctgttcgacaag
ccgttctaccgcctggtctacggtgactccgacctgctgccgggcctggtggtcgatcgt
ttcggcgacatcctggtggtgcagatcgcttcggcgaccatggaagcccacaaagatgac
gtgatcgctgcgctgacccaagtgctcaagccaagcggcatcctgttcaagaacgactcc
gccgcacgtgacgccgagggcctcaaccgctacgtcgaaaccgtgttcggcctggtgccg
gagtgggtggcgctggaagaaaacggcgtgaaattcgaagccccggtgatccagggccag
aagaccggctggttctacgaccaccgcatgaaccgcgcgcgcctggccccgtatgccaaa
ggcaagcgcgtactcgacctgtacagctacatcggcggctggggcgtgcaagctgccgcc
ttcggcgccagtgaagtgttctgcgtcgacgcctccgccttcgcccttgatggcgtagaa
cgcaacgccgcgctgaacggcttcgccgagaaaatgacctgcatcgaaggcgacgtcttt
gaagccctgaaagaactgaaagccagcgaagaacgcttcgacgtgatcgtcgccgaccca
ccggccttcatcaaacgcaaaaaagacatgaaaaacggcgaaggcgcctaccgtcgcctc
aacgaacaagccatgcgcctgctcagcaaggacggcatcctggtcagcgcctcgtgctcc
atgcacctgccggaagacgacctgcaaaatatcctgctgaccagcgcccgccatctggac
cgcaatatccagatgctcgaacgcggcggccagggcccagaccacccggtgcacccggcg
attgccgagacgcggtatatcaagagcattacttgccggttgttgccgaatagctaa
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