Pseudomonas palleroniana: LDL65_10175
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Entry
LDL65_10175 CDS
T09728
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ppae
Pseudomonas palleroniana
Pathway
ppae00300
Lysine biosynthesis
ppae00470
D-Amino acid metabolism
ppae01100
Metabolic pathways
ppae01110
Biosynthesis of secondary metabolites
ppae01120
Microbial metabolism in diverse environments
ppae01230
Biosynthesis of amino acids
Module
ppae_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ppae00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LDL65_10175 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LDL65_10175 (lysA)
Enzymes [BR:
ppae01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
LDL65_10175 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
UOP12887
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Position
2156907..2158154
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AA seq
415 aa
AA seq
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MDAFNYRDGELFAEGVALSAIAERFGTPTYVYSRAHIEAQYRSFADALEGTPSLVCYAVK
ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGKADKIVFSGVGKTREDMRRALEVGVH
CFNVESTDELERLQVVAAEMGVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIADAED
VYIRAAQLPNLEVLGVDCHIGSQLTTLPPFLDALDRLLALVDRLGECGIYLHHIDLGGGV
GVRYRDEEPPLVADYIKAALQRIEGRGLTLMFEPGRYIVANAGVLLTQVEYLKHTEHKDF
AIVDAAMNDLIRPALYQAWMNVTAVTPREGVARAYDIVGPICETGDFLAKDRQLALEEGD
LLAVHSAGAYGFVMSSNYNTRGRTAEVLVDGDQAFEVRRRETVAELYAGESLLPE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggacgcttttaactaccgggacggcgagctgttcgcggaaggcgtggcgttgtccgcg
attgccgagcgctttggcaccccgacctatgtgtactcccgtgcgcatatcgaagcccaa
taccgcagctttgccgacgcgctggaaggcacaccaagcctggtgtgctacgcggtcaag
gccaattccaacctgggtgtactgaatgtcctggcgcgcctgggcgccggtttcgacatc
gtctcccgtggcgagctggaacgcgtgctggcagccggtggcaaagcggacaagatcgtg
ttttccggcgtcggcaaaacccgcgaagacatgcgccgtgcgctggaagtcggcgtgcat
tgcttcaacgtcgaatccaccgacgagcttgagcgcctgcaagtggtcgccgccgagatg
ggtgttcgtgcgccgatctccctgcgcgtcaacccggacgtcgatgccggcacccacccg
tacatttccaccggtctcaaagagaacaagttcggcatcgccattgccgacgccgaagac
gtgtacatccgcgccgcccaactgcccaacctggaagtgctgggtgttgactgccacatc
ggctcgcaactgaccacgctgccaccgttcctggacgccctcgaccgcctgctggcactg
gtcgaccgtctcggcgaatgtggtatctacctgcaccacatcgacctcggtggtggtgtg
ggcgtgcgttatcgcgacgaagagccgccgctggtggccgactacatcaaggcagcactc
cagcgcatcgagggccgcggcctgacgctgatgttcgagccgggccgctacatcgttgcc
aatgccggcgtgctgctgacccaggtcgagtacctcaagcacaccgagcacaaggatttc
gccatcgtcgacgcggcgatgaacgacctgatccgcccggcgctgtaccaggcctggatg
aacgtcaccgctgtaacaccacgcgaaggtgttgcacgcgcctacgacatcgtcggcccg
atctgcgagaccggcgatttcctggccaaggatcgtcagttggccctggaagaaggcgac
ctgctggccgtacattcggcgggtgcctatgggtttgtcatgagttccaactacaacacc
cgcggccgtaccgccgaggtgctggtggacggtgatcaagcgttcgaagtgcgtcgccgc
gagacggtagccgagttgtatgctggcgaaagcctgctgccggagtaa
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