KEGG   Pseudomonas palleroniana: LDL65_10175
Entry
LDL65_10175       CDS       T09728                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
ppae  Pseudomonas palleroniana
Pathway
ppae00300  Lysine biosynthesis
ppae00470  D-Amino acid metabolism
ppae01100  Metabolic pathways
ppae01110  Biosynthesis of secondary metabolites
ppae01120  Microbial metabolism in diverse environments
ppae01230  Biosynthesis of amino acids
Module
ppae_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:ppae00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    LDL65_10175 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    LDL65_10175 (lysA)
Enzymes [BR:ppae01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     LDL65_10175 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N AP_endonuc_2
Other DBs
NCBI-ProteinID: UOP12887
LinkDB
Position
2156907..2158154
AA seq 415 aa
MDAFNYRDGELFAEGVALSAIAERFGTPTYVYSRAHIEAQYRSFADALEGTPSLVCYAVK
ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGKADKIVFSGVGKTREDMRRALEVGVH
CFNVESTDELERLQVVAAEMGVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIADAED
VYIRAAQLPNLEVLGVDCHIGSQLTTLPPFLDALDRLLALVDRLGECGIYLHHIDLGGGV
GVRYRDEEPPLVADYIKAALQRIEGRGLTLMFEPGRYIVANAGVLLTQVEYLKHTEHKDF
AIVDAAMNDLIRPALYQAWMNVTAVTPREGVARAYDIVGPICETGDFLAKDRQLALEEGD
LLAVHSAGAYGFVMSSNYNTRGRTAEVLVDGDQAFEVRRRETVAELYAGESLLPE
NT seq 1248 nt   +upstreamnt  +downstreamnt
atggacgcttttaactaccgggacggcgagctgttcgcggaaggcgtggcgttgtccgcg
attgccgagcgctttggcaccccgacctatgtgtactcccgtgcgcatatcgaagcccaa
taccgcagctttgccgacgcgctggaaggcacaccaagcctggtgtgctacgcggtcaag
gccaattccaacctgggtgtactgaatgtcctggcgcgcctgggcgccggtttcgacatc
gtctcccgtggcgagctggaacgcgtgctggcagccggtggcaaagcggacaagatcgtg
ttttccggcgtcggcaaaacccgcgaagacatgcgccgtgcgctggaagtcggcgtgcat
tgcttcaacgtcgaatccaccgacgagcttgagcgcctgcaagtggtcgccgccgagatg
ggtgttcgtgcgccgatctccctgcgcgtcaacccggacgtcgatgccggcacccacccg
tacatttccaccggtctcaaagagaacaagttcggcatcgccattgccgacgccgaagac
gtgtacatccgcgccgcccaactgcccaacctggaagtgctgggtgttgactgccacatc
ggctcgcaactgaccacgctgccaccgttcctggacgccctcgaccgcctgctggcactg
gtcgaccgtctcggcgaatgtggtatctacctgcaccacatcgacctcggtggtggtgtg
ggcgtgcgttatcgcgacgaagagccgccgctggtggccgactacatcaaggcagcactc
cagcgcatcgagggccgcggcctgacgctgatgttcgagccgggccgctacatcgttgcc
aatgccggcgtgctgctgacccaggtcgagtacctcaagcacaccgagcacaaggatttc
gccatcgtcgacgcggcgatgaacgacctgatccgcccggcgctgtaccaggcctggatg
aacgtcaccgctgtaacaccacgcgaaggtgttgcacgcgcctacgacatcgtcggcccg
atctgcgagaccggcgatttcctggccaaggatcgtcagttggccctggaagaaggcgac
ctgctggccgtacattcggcgggtgcctatgggtttgtcatgagttccaactacaacacc
cgcggccgtaccgccgaggtgctggtggacggtgatcaagcgttcgaagtgcgtcgccgc
gagacggtagccgagttgtatgctggcgaaagcctgctgccggagtaa

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