Pseudomonas palleroniana: LDL65_10180
Help
Entry
LDL65_10180 CDS
T09728
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ppae
Pseudomonas palleroniana
Pathway
ppae00300
Lysine biosynthesis
ppae00470
D-Amino acid metabolism
ppae01100
Metabolic pathways
ppae01110
Biosynthesis of secondary metabolites
ppae01120
Microbial metabolism in diverse environments
ppae01230
Biosynthesis of amino acids
Module
ppae_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ppae00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LDL65_10180 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LDL65_10180 (dapF)
Enzymes [BR:
ppae01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
LDL65_10180 (dapF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
UOP12888
LinkDB
All DBs
Position
2158158..2158988
Genome browser
AA seq
276 aa
AA seq
DB search
MLLRFTKMHGLGNDFMVLDLVSQHAHIQPKHAKQWGDRHTGIGFDQLLIVEAPSNPEVDF
RYRIFNSDGSEVEQCGNGARCFARFVLDKRLTAKRQIRVETKGGVIELDVRNDGQISVNM
GEPRLVPADIPFQATEQAASYALEVDGKNVDIAAVSMGNPHAVLRVNDINNAPVHELGPK
IEHHPRFPARVNVGFLQVIDRSRAQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPL
LIDLPGGRLSIEWAGPGHPVMMTGPASRVYEGQVRL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgcgttttaccaagatgcacgggctgggcaatgacttcatggtcctcgacctg
gtcagccagcacgcgcacatccagcccaaacacgccaaacagtggggcgaccgtcacacc
ggcattggcttcgaccagctgctgatcgtcgaggcgccaagcaacccggaggtggatttc
cgttatcggatcttcaactccgacggttccgaagtggaacagtgcggcaacggtgcacgt
tgctttgcgcgcttcgtgctggacaaacgcctgaccgccaaacgccagattcgcgtcgag
accaagggcggcgtgattgaactggatgtccgcaacgacggccagatcagcgtcaacatg
ggcgagccccgcctggtgccggcagacattccgttccaggctaccgagcaggccgcaagc
tacgcgctggaggttgacggcaaaaacgtcgacatcgctgccgtctccatgggcaacccg
catgccgtgctgcgggtcaatgacatcaacaacgctcctgtgcatgaattggggccgaaa
atcgaacatcacccgcgctttccggcacgggtcaatgtgggcttcctgcaggtgatcgac
cgttcccgcgcgcaattgcgtgtatgggaacgcggcgccggcgaaacccaggcttgcggt
accggcgcttgcgccgctgccgtggccgcgatcagccaggggtggatggattcgccgttg
ctgatcgacctgcccggcggacgcttgtccatcgaatgggcaggccctggccacccggtg
atgatgaccgggccggcctcgcgcgtatacgaaggacaggtccgtctatga
DBGET
integrated database retrieval system