Pseudomonas palleroniana: LDL65_10525
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Entry
LDL65_10525 CDS
T09728
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
KO
K11891
type VI secretion system protein ImpL
Organism
ppae
Pseudomonas palleroniana
Pathway
ppae02025
Biofilm formation - Pseudomonas aeruginosa
ppae03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ppae00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LDL65_10525 (tssM)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
LDL65_10525 (tssM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppae02044
]
LDL65_10525 (tssM)
Secretion system [BR:
ppae02044
]
Type VI secretion system
Imp/Vas secretion system core components
LDL65_10525 (tssM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IcmF-related_N
IcmF-related
IcmF_C
IcmF_helical
T7_gp14
DUF2383
Motif
Other DBs
NCBI-ProteinID:
UOP12956
LinkDB
All DBs
Position
complement(2229614..2233114)
Genome browser
AA seq
1166 aa
AA seq
DB search
MKAFFSFMIRWVIPVLGLIALSLIIWFVGPLLDLLMPEGRRWALIILVFAVWIAYRVFRI
IQARRQAAEVMRSLAAQTPVDPNSVATAEELSTLRQRMDEALALLKKAKLGGDERRNLYE
LPWYVIIGPPGSGKTTALVNSGLHFPLAAQLGAGAVRGVGGTRNCDWWFTDQAVLLDTAG
RYTTQDSNSTVDKAAWLGFLDLLKKQRSRRPIDGAFIAISLSDLLLGTEAERAAHAAAIR
LRIQELYTQLGVRFPIYLMLTKLDLVPGFMEFFDNLSKEDRAQVWGMTFALDDGKHSDSP
LAHLQSEFAGLEQRLNERLVERLQQERDPARRDLIYGFPQQFGALKDCLQSFLDGVFKPN
AFEERVLLRGVYFTSGTQEGSPIDRLIGAMAQSMNLDRQHLARQSGTGRSYFIEKLFSAV
AFAERGLVGVNPKVERRRKWIARGVLAATVALVVVVSSLWWVSYRANQAYIAQVDQKVAP
LGQAVQNLSPAQREVLAVLPLLNATKNLAGDPPGWAEGLGLYQGDMLEAESGSVYRKLLI
AVFAPRLVTRIEEQLRGGGNSDFLYEGLKAYLMLADSEHYDPDFIKAWIALDWDRNLPRD
LPADQRQALSGHLQALFDRHPPNARLDPRLIDDLRRQLQQLPVAQRVYDRVKRQKLPDGI
PDFRINEAAGRDAALVFSRKSGKPLGEPLSGFFTAKGYRQAFLLSSLNQTGTLAEEQWVL
GREQADQQNVVSLAGDVRRLYFQDYQRQWDALLADIDFVPITSVAQAADVLRVISGPTSP
LKKLLVAVAKETDLQAEERQLAAKGVPVEGGVDKLKERLGSLLGQEQQAASQPQVADDPV
TAHFAELNSIVSKNEGEPAAIDGLLADMNALYVQVSAMVGASGDALLGEAKNQAAAAATR
VSLNAERQPPLVQGMVKSVVNSTTNSMMGGVRNQLNAAWVSEVVNVYRQSLAGRYPMSPG
SARDATLDDFGQFFGVGGVMDNYFRKYLQPYVDTSTPTWRWQPGAAQKLGIAPGVLQTFQ
RAAAIRDAFFRAGGTQPIVRFELKPVSMDPTITQFLLDLDGQQLSYDHGPSRPVAMQWPN
PGSIGVVRISIMPPSASGRSGVTLDGPWAWFRLLEQSDLTAGNSPDRFNLRLRVDGASIA
YELRANSAFNPFKSRVLSGFSLPERL
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggcgtttttcagtttcatgattcgctgggtgatcccggtactgggcctgatcgcc
ctgagcctgatcatctggtttgtcgggccgctgctcgacctgttgatgccggaagggcgc
cgctgggcgctgatcatcctggtgtttgcggtgtggatcgcctaccgcgtgttccgcatc
atccaggcgcgtcggcaggccgccgaagtgatgcgcagcctggcggcgcaaaccccggtc
gaccccaacagtgtcgccaccgccgaagaactcagcaccctgcgccagcgcatggacgag
gccctggcgctgctgaagaaagccaagctcggtggcgatgagcggcgcaacctctacgaa
ttgccgtggtacgtgatcatcggcccaccgggttcgggcaagaccaccgcgctggtcaat
tccgggctgcatttcccgctggcggcccaattgggcgccggggccgtgcgcggtgtcggc
ggtacgcgcaactgcgactggtggtttaccgaccaggccgtgctgctcgataccgctggc
cgctacaccactcaagacagcaactccacggtcgataaagccgcgtggctgggtttcctc
gacctactgaaaaagcaacgctcacgccgcccgatcgacggggcgttcattgcgatcagc
ctgtcggatctgttgctcgggactgaagccgagcgcgctgcccacgcggcggcgattcgc
ttgcgtatccaggagctgtatacccagctgggcgtgcgtttccccatctacctgatgctg
accaagctcgacttggtgcccggcttcatggagttcttcgacaacctgagcaaggaagac
cgcgcccaggtatggggcatgacctttgccctagacgacggcaagcacagcgacagcccg
ctggcacatctgcaaagcgaattcgcagggctggaacaacgccttaacgagcgcctggtg
gaacgcctgcaacaggaacgcgacccggcgcgacgtgacctaatctacggcttcccgcag
cagttcggggccttgaaagactgcctgcaaagcttcctcgacggtgtgttcaaacccaat
gccttcgaagaacgcgtgctgctgcgcggcgtgtacttcaccagcggtactcaggaaggc
agcccgattgatcgcctgatcggcgccatggcccagagcatgaaccttgatcgccagcac
ctggcccgccagagcggcaccgggcgcagttacttcatcgaaaaactgttcagcgccgtg
gcgtttgccgaacgtgggctggtcggggtgaacccgaaggtcgaacgtcggcgcaagtgg
attgcacgcggcgtcctggcggccaccgtggccttggtggtggtggtcagcagtttgtgg
tgggtgagttatcgtgccaaccaggcgtatatcgcccaggtcgaccagaaggttgcgcca
ttgggccaggcggtgcagaacctgagcccggcccagcgtgaagtgctcgccgtgctgccg
ttgctcaacgccacgaaaaaccttgccggcgatccgcctggctgggccgaaggcttgggc
ctgtaccagggcgatatgctcgaagccgaatccggcagcgtgtaccgcaaactgctgatc
gcggtatttgcgccgcgtctggtgacgcgtatcgaagagcaactgcgtggcggtggcaac
tccgacttcctgtacgaagggctcaaggcttacctgatgcttgccgacagcgagcactac
gacccggacttcatcaaagcctggatcgccctggattgggaccgcaacctgccccgcgat
ttgccggccgatcagcgtcaggccttgagtgggcatttgcaggccctgtttgaccgccat
ccaccgaatgcgcgcctcgatccgcggctgatcgacgacctgcgtcgccagttgcaacag
ctgccggtggcccaacgtgtgtacgaccgggtcaagcgccagaaattgcccgacggtatc
ccggactttcgcatcaatgaagccgccggccgcgatgccgcactggtcttcagtcgcaag
agcggcaagccgctgggtgagccactcagtggtttcttcaccgccaagggctaccgccag
gcgtttttgctgagcagcctgaaccagaccggcacgctcgccgaagagcaatgggtgctg
ggccgcgagcaagccgatcaacagaacgtggtgagcctggccggtgacgtgcgccgcctg
tatttccaggactaccagcgccaatgggacgcgctgttggcagacatcgactttgtaccg
atcaccagcgtggctcaggcggccgatgtgctgcgggtgatttccgggccgacctcaccg
ctgaaaaaactgttggtggcggtggccaaggaaaccgacctgcaagccgaggaacgccag
ctggcagccaaaggcgtgccggtggaaggtggcgtcgacaagctcaaggaacgcctgggc
agcctgctcggccaggagcaacaggcggccagccagccgcaggtggcggacgatccggtg
accgcacactttgccgaactcaacagcattgtcagcaagaatgagggcgagccggcggcc
atcgacggcctgctcgcggacatgaacgcgttgtatgtgcaggtcagcgccatggtcggc
gccagtggcgatgccttgctcggcgaggcgaagaaccaggcggcggctgcggccacgcgg
gtcagcctgaatgccgagcgccagccacccttggtgcagggcatggtcaagtcggtggtc
aactccaccaccaacagcatgatgggcggggtgcgcaaccaactgaacgcggcctgggtc
agcgaagtggtcaatgtgtatcgccagtccctggccgggcgctacccgatgtcgccgggc
agtgcgcgggacgcgaccctggatgactttggccagttttttggcgtgggcggggtcatg
gacaactacttccgcaagtacctgcagccgtatgtggacacctccaccccaacctggcgc
tggcagccgggcgcggcacaaaagctcgggatcgcgccgggtgtgctgcagactttccag
cgcgcggcggccattcgtgatgcgttcttccgcgccgggggcacccagcccatcgtacgg
ttcgaactcaagccggtgtcgatggacccgaccatcacccagttcctgctcgatctcgat
ggccagcaattgagctatgaccacggccccagccgcccggttgcgatgcaatggccgaac
cccggcagcattggcgtggtgcgtatttcgatcatgccgccgtcggccagtgggcgctcc
ggtgtgaccctggatgggccgtgggcctggttccgcctgctggagcagtcggacctcacg
gccggtaactcgccggatcgcttcaacctgcgcctgcgggtcgacggcgcaagcattgcc
tacgagttacgcgccaacagcgccttcaacccgttcaagagccgcgtgctcagcggtttc
agcctgccggagcggttatga
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