Pseudomonas palleroniana: LDL65_10585
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Entry
LDL65_10585 CDS
T09728
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
ppae
Pseudomonas palleroniana
Pathway
ppae02025
Biofilm formation - Pseudomonas aeruginosa
ppae03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ppae00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LDL65_10585 (tssH)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
LDL65_10585 (tssH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppae02044
]
LDL65_10585 (tssH)
Secretion system [BR:
ppae02044
]
Type VI secretion system
Imp/Vas secretion system core components
LDL65_10585 (tssH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
AAA_16
AAA_22
AAA_25
Zeta_toxin
Sigma54_activat
TniB
nSTAND3
AAA_7
ATPase_2
NACHT
AAA_14
AAA_18
Torsin
Clp_N
Hpr_kinase_C
CbiA
SRP54
Rootletin
NBD_SMAX1
Motif
Other DBs
NCBI-ProteinID:
UOP12968
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All DBs
Position
2245226..2247883
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AA seq
885 aa
AA seq
DB search
MGEISRAALFGKLNSVAYKAIEAATVFCKLRGNPYVELAHWFHQLLQLQDSDLHRIIRQF
NVEPARLARDLTEALDRLPRGSTSITDLSSHVEEAVERGWVYGSLMFGESQVRTGYLVLG
ILKTPSLRHALLGLSSEFDKIKAEALSERFDEYVGDSPENALSASDGFNAGAVPGEASGA
MAPSAMGKQEALKRFTVDLTEQARSGKLDPIVGRDEEIRQLVDILMRRRQNNPILTGEAG
VGKTAVVEGFALRIVAGDVPPALKDVELRSLDVGLLQAGASMKGEFEQRLRQVIEDVQAS
PKPIILFIDEAHTLVGAGGAAGTGDAANLLKPALARGTLRTVAATTWAEYKKHIEKDPAL
TRRFQVVQVAEPSEDKALLMMRGVASTMEQHHQVQILDEALEASVKLSHRYIPARQLPDK
SVSLLDTACARVAISLHAVPAEVDDSRRRIEALETELQIIAREHAIGIAIGARQSNTEAL
LGAERERLATLESRWAEEKALVDELLATRATLREKVGAVDSGNDELRTQLVDLQQRLSAL
QGETPLILPTVDYQAVASVVADWTGIPVGRMARNELETVLNLDQHLKKRIIGQDHALQMI
AKRIQTSRAGLDNPSKPIGVFMLAGTSGVGKTETALALAEAMYGGEQNVITINMSEFQEA
HTVSTLKGAPPGYIGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVHEIFFQVFDKGVME
DGEGRVIDFKNTLILLTTNAGTELISHVCKDPANVPEPEEIAKALRQPLLEIFPPALLGR
LVTIPYYPLSDEMLKAITRLQLNRIKKRVESTHKVAFDYDDAVVDLIVSRCTETESGGRM
IDTILTNSLLPDMSREFLTRMLEGKALAGVRISSRDNELHYEFND
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaatcagtcgcgccgcattgttcggcaaactcaacagcgtggcctacaaggcc
atcgaagccgccaccgtattctgcaagctgcggggcaacccgtatgtggaactggcccac
tggtttcatcaactgctgcaactgcaggactcggacctgcaccgcatcattcgccagttc
aacgtggagccggcgcgcctggcccgtgacctgactgaagcgctggaccgcttgccccgc
ggctcgacctcgatcaccgacctgtcctcccatgtggaagaggccgtggagcgcggttgg
gtctacggcagcctgatgttcggcgaaagccaggtgcgcaccggttacctggtgttgggc
atcctcaagacgccgagcctgcgccatgcgctgctgggcctgtcttccgagttcgacaaa
atcaaggccgaggccctgagcgagcgctttgatgaatacgtcggtgactcgccggagaac
gccctgagcgccagcgacggtttcaacgccggcgccgtgccgggcgaagccagcggcgcc
atggcgccaagtgccatgggcaagcaggaagccctcaagcgctttaccgtcgacctgacc
gagcaggcccgtagcggcaagctcgaccccatcgtcggccgtgacgaagagatccgccaa
ctggtcgacatcctgatgcgccgccgccagaacaacccgattctcaccggtgaagccggt
gtgggcaaaaccgccgtggtcgaaggtttcgccctgcgcatcgtcgccggtgacgtgccg
cctgcgctcaaggatgtggaattgcgcagcctcgatgtgggcctgctgcaagccggcgcc
agcatgaaaggcgagttcgagcagcgcctgcgccaagtgatcgaagacgtccaggcgtcg
cccaagccgatcatcctgtttatcgacgaagctcacaccctggtcggtgccggtggcgcc
gccggcacgggcgacgccgccaacctgctcaaaccggcattggcccgtggcaccttgcgc
accgtggccgcgaccacgtgggccgagtacaagaagcacattgaaaaagacccggccctg
acccgccgcttccaggtagtgcaagtggccgagccgtcggaagacaaggcgctgctgatg
atgcgcggcgtggcctcgaccatggaacagcaccaccaggtgcagatcctcgacgaagcc
ctggaagcctcggtgaagctgtcccaccgctacatcccggcgcgccagttgccggataaa
tccgtaagcctgctagacaccgcctgtgcccgcgttgccatcagcctgcacgcggtgccg
gctgaagtggacgacagccgccgtcgtatcgaagccctggaaaccgagctgcaaatcatc
gcccgcgagcatgccatcggcattgcgattggggcccgtcaaagcaacaccgaagcgctg
ttgggtgccgagcgtgaacgtcttgcaacgctggagagccgctgggccgaagagaaagca
ctggtcgatgagttgctcgccacccgtgccaccctgcgtgaaaaggttggcgcggtggac
agcggcaacgatgaattgcgcacgcagctggtcgatctgcaacagcgcctcagcgccctg
caaggcgaaaccccgctgatcctgccgaccgtggattaccaggccgtggcctcggtggtc
gccgactggaccggtatcccggtgggccgcatggcccgcaacgagctggagaccgtgctc
aacctcgaccagcacctgaagaagcgcatcatcggccaggatcacgccctgcagatgatc
gccaagcgcatccagacctcccgcgccggcctcgacaacccgagcaagccgattggcgtg
ttcatgctggccggcacctcaggcgtgggcaagaccgaaaccgccctggccctggccgaa
gccatgtacggcggcgagcagaacgtcatcaccatcaacatgagcgagttccaggaagcc
cacaccgtatccaccctcaagggcgcgccaccgggctacatcggttacggcgaaggcggc
gtgctgaccgaggcggtgcgacgcaaaccctacagcgtggtgctgctggacgaggtggaa
aaagcccacccggacgtgcacgagatcttcttccaggtgttcgacaagggcgtgatggaa
gacggtgaaggccgggtgatcgacttcaagaacaccctgatcctgttgaccaccaacgcc
ggcaccgagctgatctcccacgtttgcaaagacccggcgaacgtgccggagccggaagag
atcgccaaggccctgcgccaaccgctgctggaaatcttcccgccggcgttgctgggtcgc
ctggtgaccattccgtactacccgctcagcgacgagatgctcaaggcgatcacccgcctg
cagctcaaccgcatcaaaaaacgcgtggaaagtacgcacaaggtggccttcgactacgac
gacgcggtggtcgacctgatcgtctcgcgctgcaccgaaaccgaaagcggtggccgtatg
atcgacaccatcctcaccaacagcttgctgccggacatgagccgtgagttcctcacgcgc
atgctcgaaggcaaggcgttggcgggtgtgcgcatcagcagccgggataacgaattgcac
tacgagttcaacgattga
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