KEGG   Pseudomonas palleroniana: LDL65_12650
Entry
LDL65_12650       CDS       T09728                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
ppae  Pseudomonas palleroniana
Pathway
ppae02020  Two-component system
Brite
KEGG Orthology (KO) [BR:ppae00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    LDL65_12650
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:ppae02022]
    LDL65_12650
Two-component system [BR:ppae02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   LDL65_12650
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_5 AAA_2 HTH_50 FleQ HTH_8 AAA DUF6716 AAA_16 HTH_10
Other DBs
NCBI-ProteinID: UOP13360
LinkDB
Position
complement(2739877..2741253)
AA seq 458 aa
MSIDNQIQVVLIDDDPHLRQALCQTLDLAGLAVLTLGEATGLTARLTRDWPGVVVSDIRM
PGMDGLELLAELHGQDPDLPVLLITGHGDVPLAVQAMRAGAYDFLEKPFASDALLDSVRR
ALALRRLVLDNRSLRLALSDRQQLSTRLVGHSPQMLRLREQIGALAATKADVLILGETGA
GKEVVARALHDLSSRRSGPFVAINAGALAESVVESELFGHEPGAFTGAQKRRIGKFEFAN
GGTLFLDEIESMSLDVQVKLLRLLQERVVERLGGNQLIPLDIRIIAATKEDLRQAADQGR
FRADLYYRLNVAPLRIPPLRERGEDALMLFQHFADEAGSRHGLPLQELQPGQRALLLRHS
WPGNVRELQNAAERFALGLELALDNTQDSPSTAVLTSTPGGLSEQVEQFEKSLIAAELTR
PHSSVRSLAEALGIPRKTLHDKLRKHGLIFANQSTDEE
NT seq 1377 nt   +upstreamnt  +downstreamnt
atgagtatcgataaccagattcaggtggtgttgatcgacgacgatccacacctgcgtcag
gccctgtgccagaccctggacctggccgggctggctgtcctgacgctgggtgaagcgacc
ggcctcactgcgcgcttgacgcgggactggccaggggtagtggtcagcgacattcgcatg
cccggcatggacggcctggagctgctcgccgaactgcacggccaggacccggacctgccg
gtgctgttgatcaccggccacggcgacgtgccgttggcggtgcaagccatgcgtgccggg
gcctacgactttctggaaaaacccttcgccagcgacgccctgctcgatagcgtgcgccgc
gccctggcgctgcgccgcctggtgctggacaaccgcagcctgcgcctggccctcagcgac
cgccagcaactgagcacgcgtctggtggggcactcgccacaaatgctgcgcctgcgcgag
cagatcggtgccctggcggcgaccaaggccgacgtactgatcctcggtgaaaccggcgcc
ggcaaggaagtcgtggcgcgagcgctgcatgatttgtcgagccggcgcagcgggccgttc
gtcgcgatcaacgccggcgccctggctgaatcggtggtggaaagcgaactgttcggccat
gaacccggtgcctttaccggcgcgcagaagcgccgtatcggcaagttcgaatttgccaac
ggcggcacactgttcctcgatgaaatcgaaagcatgagcctggatgtccaggtcaagctg
cttcgcctgctgcaggagcgcgtggtcgagcgtctgggtggtaaccaactgatcccgctc
gatatccgcatcattgccgccaccaaggaagatctgcgccaggccgccgaccaagggcgc
ttccgtgccgacctgtattaccggctaaacgtcgctccgttgcgcattccgccgctgcgt
gaacgaggggaagatgcgttgatgctgttccaacacttcgcggacgaagccggcagccgc
cacggcctgccattgcaggagttgcaaccgggccagcgtgcgctgctgttgcgccacagc
tggccgggcaatgtgcgcgaactgcagaatgcagccgagcgcttcgccttgggcctggaa
ctggccttggacaacacccaggacagcccttccacggccgtgctcacctccacaccgggc
ggcttgagcgaacaagtcgaacagttcgaaaaaagcctgatcgccgccgaactgacgcgc
ccccacagctccgtgcgcagcctcgccgaggcgctcggcatcccgcgcaaaaccctgcac
gacaaattgcgcaagcacggcttgatcttcgccaaccagagtaccgacgaagaatga

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