Pseudomonas palleroniana: LDL65_12665
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Entry
LDL65_12665 CDS
T09728
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
ppae
Pseudomonas palleroniana
Pathway
ppae00521
Streptomycin biosynthesis
ppae00523
Polyketide sugar unit biosynthesis
ppae00541
Biosynthesis of various nucleotide sugars
ppae01100
Metabolic pathways
ppae01110
Biosynthesis of secondary metabolites
ppae01250
Biosynthesis of nucleotide sugars
Module
ppae_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
ppae00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LDL65_12665 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LDL65_12665 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LDL65_12665 (rfbC)
Enzymes [BR:
ppae01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
LDL65_12665 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
UOP13363
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All DBs
Position
complement(2743973..2744518)
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AA seq
181 aa
AA seq
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MNVTATELPGVLIIEPKVFGDDRGFFYESFNARHFEQATGLQQQFVQDNHSRSQKGVLRG
LHYQVEHAQGKLVRVTAGEVLDVAVDIRRSSPNFGKWASVRLSAGNSRQLWIPPGFAHGF
VVLSDYAEFLYKTTDYYTPAAERCISWNDPTLNIDWQLDGPPILSAKDQNGKSFKDADVF
S
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtaaccgcgactgaattgcccggtgtattgatcatcgaaccgaaggtttttggc
gatgatcgcggttttttctatgaaagtttcaacgcccggcattttgaacaagccaccggg
ttgcaacagcagtttgtgcaggacaaccactcacgctcgcaaaagggcgtgttgcggggc
ctgcactatcaggtcgagcacgcccagggcaaactggtgcgtgtgacagccggtgaggtt
ctggacgtggcggtggatatccgccgcagttcgcccaacttcggcaaatgggccagcgtg
cgcctgtctgccggcaatagtcgccaactgtggattccaccggggttcgcccatggtttt
gtggtactcagtgattacgccgagttcctctacaaaaccaccgactattacacgccggca
gccgaacgttgcatcagttggaacgaccccacgctcaacattgactggcaactcgatggc
ccgccgatcctgtccgccaaagaccagaacggcaagagtttcaaagacgcggacgtgttc
tcgtga
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