Pseudomonas palleroniana: LDL65_12675
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Entry
LDL65_12675 CDS
T09728
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
ppae
Pseudomonas palleroniana
Pathway
ppae00521
Streptomycin biosynthesis
ppae00523
Polyketide sugar unit biosynthesis
ppae00525
Acarbose and validamycin biosynthesis
ppae00541
Biosynthesis of various nucleotide sugars
ppae01100
Metabolic pathways
ppae01110
Biosynthesis of secondary metabolites
ppae01250
Biosynthesis of nucleotide sugars
Module
ppae_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
ppae00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LDL65_12675 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LDL65_12675 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
LDL65_12675 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LDL65_12675 (rfbB)
00525 Acarbose and validamycin biosynthesis
LDL65_12675 (rfbB)
Enzymes [BR:
ppae01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
LDL65_12675 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
KR
NAD_binding_10
NmrA
Motif
Other DBs
NCBI-ProteinID:
UOP13365
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All DBs
Position
complement(2745390..2746472)
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AA seq
360 aa
AA seq
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MRILITGGAGFIGSALIRHLIEHTEHEVLNLDKLTYAGNLESLTSIASNSRYEFVQADIV
DQATVSAVLARFEPQAIMHLAAESHVDRSIDGPSDFIQTNIVGTYSLLEATRAYWQKLAE
PAKSAFRFHHISTDEVYGDLHGVDDLFTETTPYAPSSPYSASKAASDHLVRAWQRTYGLP
VLLTNCSNNYGPFHFPEKLIPLVILNALAGKPLPVYGDGLQVRDWLFVEDHARALLKVVT
TGVVGETYNIGGHNEQKNIDVVRGICALLEELAPQRPAGVEKFTDLITFVKDRPGHDQRY
AIDASKIERELGWVPQETFETGLRKTVQWYLDNLEWCRRVQDGSYQGERLGNTDAKDLIA
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattctcatcaccggcggtgccggatttattggctccgccctgattcgccacctg
atagaacacactgagcacgaagtgcttaacctggacaaactcacctacgccggcaacctt
gagtcgctgaccagcatcgcgtccaacagccgctatgagttcgtccaggccgacatcgtc
gaccaggccaccgtcagtgccgtactggcgcgcttcgagccgcaggcgatcatgcacctg
gcggccgagtcccatgtcgaccgctccattgacggtccgtcggattttatccagaccaac
atcgtcggtacctacagcctgctggaagccacacgggcttattggcagaagctggcagaa
ccggccaaaagcgcgttccgctttcaccacatctccacggatgaggtatacggcgacctg
cacggtgtagacgatctcttcactgaaaccacgccttacgcacccagctcaccttattcc
gcgagcaaggcagcctccgaccacctggtacgcgcctggcagcgcacttatggcctgccg
gtgttgctgaccaactgctcgaacaactacgggccgttccacttccccgagaagctgatc
ccgctggtcatcctcaacgccctcgcgggcaagccactgccggtctatggcgatggtttg
caagtgcgcgactggctgttcgtcgaagaccacgcccgtgccctgctcaaggtggtaacc
accggcgtagtcggcgagacctacaacattggtggtcacaatgagcagaagaacatcgat
gtggtgcgcggcatctgcgccctgctcgaagaactggcgccgcaacgcccggccggcgtg
gaaaaattcaccgacctgatcaccttcgtcaaggatcgcccaggccacgatcagcgctac
gcgatcgatgccagcaagatcgaacgcgagctgggctgggttccgcaagaaaccttcgaa
accggtctgcgcaagaccgtgcagtggtacctcgacaacctggaatggtgccgcagggtc
caggatggcagttatcaaggtgaacgactcggcaacactgacgcaaaggatctgatcgca
tga
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