Pseudomonas palleroniana: LDL65_13280
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Entry
LDL65_13280 CDS
T09728
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ppae
Pseudomonas palleroniana
Pathway
ppae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LDL65_13280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppae03400
]
LDL65_13280
Enzymes [BR:
ppae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LDL65_13280
DNA repair and recombination proteins [BR:
ppae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LDL65_13280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
Zn_ribbon_6
HypA
AAA_30
iSirtuin
PriA-like_WH
PIF1
TrwB_AAD_bind
AAA_22
Zeta_toxin
ADDB_N
RUBY_RBDX
Zn_ribbon_15
Motif
Other DBs
NCBI-ProteinID:
UOP13480
LinkDB
All DBs
Position
complement(2879094..2881313)
Genome browser
AA seq
739 aa
AA seq
DB search
MPDAILRLALPSPLRRLFDYRAPAGVSRAQLQPGMRVRVPFGRREMIGILVEIADHSEVP
AEKLKPALAILDATAPLPPALFKLCLWTAQYYQHSLGDTLSWALPVLLRQGELAEARQER
FWSIVPGARLDDPRIARAPRQREALATLAQHPHGVAHPLLSKLMLSKDSLDLLLAKGLVQ
VEIRKHAPDPRHEHWLAQPELPLNTEQRAAYEAIRAGFDSFHAFLLAGVTGSGKTEVYLQ
LIRETLQAGKQALVLIPEINLGPQTLARFEQRFNARIALVHSAVNDRERLESWLAARDGE
ADIIIGTRSALFTPMKNPGLIIIDEEHDGSYKQQEGLHYHARDLALVRARQEDIPIVLGS
ATPSLESLHNAYTGRYGLLRLNERAGGAKQPRFLRLDVKSRPLDSGISGPMQQAIGQTLA
AGQQVLVFLNRRGFAPTLLCHDCGWMSECERCDARMTVHQRYGELRCHHCGHVERVPRHC
PQCGKVDLRPVGAGTERAEERLGILFPDYPVLRVDRDSTSRKDAMNQLFATIQKGQPCIL
IGTQMLAKGHHFPRVTLVSILDADGGLFSGDFRASERMAQLIVQVAGRAGRAEEPGKVII
QTHLADHPLLIQLTEEGYFAFAEQALSERRAAGLPPFAHLALLRAEAHKPGQAEGFLDEA
CSLAERLLGELGLTGIELLGPVPAPMERRAGRYRAQLLLQATSRAPLHRLLSSWLLALEQ
MPSGRQVRWSLDVDPVDLY
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgacgccattttgcgcctagccctgccctcgcccctgcgccgcctgttcgactac
cgggccccggccggcgtatcacgtgcgcagttgcagccaggcatgcgcgtgcgcgtaccg
ttcgggcggcgggaaatgatcgggatcctggtggaaatcgccgaccacagcgaagtcccc
gccgaaaagctcaagccggccctggccatcctcgacgccactgccccactgccgcccgcg
ctgttcaagctgtgcctgtggaccgcccagtactaccaacacagcctcggcgataccttg
agctgggcgctgccggtgttgctgcgccaaggcgaactggcggaggctcgccaggaacgc
ttctggtcgatagtccccggggcgcgcctcgacgacccgcgcatcgcccgcgcgccgcgt
cagcgtgaagccctggccacgttggcccagcatccccatggcgtggcgcatccgttactg
agcaagctgatgctcagcaaagacagcctcgacctgctgctggccaagggcctggtgcag
gtggaaatccgcaagcacgcccccgacccacgccatgaacactggctggcccagcccgaa
ctgccgctgaacactgaacaacgggcggcttatgaagccattcgtgcaggcttcgacagc
ttccacgcattccttctggccggcgtcaccggcagcggcaagaccgaagtctatttgcag
ttgatccgcgaaaccctgcaagccggcaaacaggccctggtgttgatccccgagatcaac
ctcggcccgcaaaccctggcgcgcttcgaacagcgcttcaacgcccgtatcgccctggtg
cactcggcggtcaatgaccgtgaacgcctggagtcctggctggctgcgcgcgacggcgag
gccgacatcattatcggcacccgctcggcgctgttcacgccgatgaagaaccccgggttg
atcatcatcgacgaggagcatgacggctcctataaacagcaggaaggcttacactatcac
gcccgcgacctcgcgctggtgcgagcgcgccaggaagacattcctatcgtgttgggttcc
gccacgccctcactggagagcctgcacaacgcttacaccggccgttatggcctgctgcgc
ctcaacgagcgcgccggtggcgccaaacaaccgcgcttcctgcgcctggacgtaaaaagc
cggccgctggacagcggcatttccgggccgatgcaacaagccatcggccagacactcgcc
gccggccagcaggttctggtatttctcaaccgtcggggctttgcgccgacgctgctgtgc
cacgattgcggctggatgtccgagtgcgagcgctgcgatgcgcgcatgaccgtgcaccag
cgctacggcgagttgcgctgccaccactgtggccacgtggaacgggtgccgcgccactgc
ccccagtgcggcaaggtggacctgcgcccggtgggcgccggcaccgagcgcgccgaggaa
cgcctggggattctgttcccggattacccggtgctgcgggtcgaccgcgacagcacctcg
cgtaaagacgccatgaaccagctgttcgccaccatccagaagggccagccgtgcatcctg
atcggcactcagatgctcgccaaggggcatcactttccacgggtgacgctggtgtcgatc
ctggatgccgatggcgggctgttctccggcgacttccgcgccagtgagcgcatggcgcag
ttgatcgtacaagtcgcaggccgggccgggcgcgccgaagagccaggcaaggtgattatc
cagacccacttggccgaccatccgctgctgatccagctgacggaagaaggttactttgcc
ttcgccgaacaggcgctcagcgaacgccgcgccgccggtctgccgccgttcgcccacctg
gccttgttgcgggctgaagcacacaaaccgggccaggccgaaggttttctcgatgaggcg
tgcagcctcgccgaacgtttattgggcgaactgggtctgaccggcatcgaattgctcggc
ccggtgcctgcccccatggagcgccgcgccgggcgctatcgcgcccagctactcttgcag
gcgacgtcccgcgcgcccctgcatcggctattaagtagctggttgcttgccctggagcaa
atgcccagtggccggcaggtgcgatggtcgttggatgtggacccggtagatttgtattga
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