KEGG   Pseudomonas palleroniana: LDL65_13810
Entry
LDL65_13810       CDS       T09728                                 
Symbol
orn
Name
(GenBank) oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
ppae  Pseudomonas palleroniana
Pathway
ppae03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ppae00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    LDL65_13810 (orn)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppae03019]
    LDL65_13810 (orn)
   03009 Ribosome biogenesis [BR:ppae03009]
    LDL65_13810 (orn)
Messenger RNA biogenesis [BR:ppae03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     LDL65_13810 (orn)
Ribosome biogenesis [BR:ppae03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    LDL65_13810 (orn)
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: UOP13582
LinkDB
Position
3013213..3013755
AA seq 180 aa
MQNPQNLIWIDLEMTGLNPDTDVIIEMATIVTDSNLNTLAEGPVIAIHHSDAVLATMDEW
NTRTHGNSGLTQRVRDSRISMAEAEAQTIAFLEKWVPKGKSPICGNSICQDRRFLYTHMK
ALESYFHYRNLDVSTLKELAARWAPEVKDSFHKGSTHLALDDIRESIAELQHYRKHFIKA
NT seq 543 nt   +upstreamnt  +downstreamnt
atgcaaaacccacagaacctgatttggatcgatctggaaatgaccggtctgaaccccgac
accgacgtcatcatcgagatggcgaccattgtcaccgacagcaacctcaacaccctggcc
gaaggtccggtgattgccatccatcacagtgatgcagtgttggccaccatggacgagtgg
aatacccgcacccacggcaactccggcctgacccagcgggtgcgcgacagccgtatcagt
atggccgaagccgaggcccagaccatcgccttcctggagaagtgggtgcccaagggcaag
tcaccgatctgcggcaacagtatctgccaggaccgccgcttcctttatacccacatgaag
gcgctggaaagctacttccattaccgcaacctggatgtgtccaccttgaaagagctggcc
gcacgctgggcgccggaagtcaaagacagcttccacaaaggcagcacgcacctggcactg
gatgatattcgcgagtcgattgccgagttgcagcactaccgcaagcatttcatcaaggct
tga

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