Pseudomonas palleroniana: LDL65_13810
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Entry
LDL65_13810 CDS
T09728
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ppae
Pseudomonas palleroniana
Pathway
ppae03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ppae00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LDL65_13810 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppae03019
]
LDL65_13810 (orn)
03009 Ribosome biogenesis [BR:
ppae03009
]
LDL65_13810 (orn)
Messenger RNA biogenesis [BR:
ppae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LDL65_13810 (orn)
Ribosome biogenesis [BR:
ppae03009
]
Eukaryotic type
Pre-60S particles
RNases
LDL65_13810 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
UOP13582
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All DBs
Position
3013213..3013755
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AA seq
180 aa
AA seq
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MQNPQNLIWIDLEMTGLNPDTDVIIEMATIVTDSNLNTLAEGPVIAIHHSDAVLATMDEW
NTRTHGNSGLTQRVRDSRISMAEAEAQTIAFLEKWVPKGKSPICGNSICQDRRFLYTHMK
ALESYFHYRNLDVSTLKELAARWAPEVKDSFHKGSTHLALDDIRESIAELQHYRKHFIKA
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacccacagaacctgatttggatcgatctggaaatgaccggtctgaaccccgac
accgacgtcatcatcgagatggcgaccattgtcaccgacagcaacctcaacaccctggcc
gaaggtccggtgattgccatccatcacagtgatgcagtgttggccaccatggacgagtgg
aatacccgcacccacggcaactccggcctgacccagcgggtgcgcgacagccgtatcagt
atggccgaagccgaggcccagaccatcgccttcctggagaagtgggtgcccaagggcaag
tcaccgatctgcggcaacagtatctgccaggaccgccgcttcctttatacccacatgaag
gcgctggaaagctacttccattaccgcaacctggatgtgtccaccttgaaagagctggcc
gcacgctgggcgccggaagtcaaagacagcttccacaaaggcagcacgcacctggcactg
gatgatattcgcgagtcgattgccgagttgcagcactaccgcaagcatttcatcaaggct
tga
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