Pseudomonas palleroniana: LDL65_16520
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Entry
LDL65_16520 CDS
T09728
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ppae
Pseudomonas palleroniana
Pathway
ppae02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppae00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LDL65_16520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppae03021
]
LDL65_16520
Transcription machinery [BR:
ppae03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LDL65_16520
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_20
HTH_24
GerE
HTH_28
Xre-like-HTH
HTH_10
Trp_repressor
TnsD
HTH_11
HTH_5
HTH_38
HTH_40
CHASE3
Motif
Other DBs
NCBI-ProteinID:
UOP08706
LinkDB
All DBs
Position
complement(3596543..3597031)
Genome browser
AA seq
162 aa
AA seq
DB search
MQPSNTVEVLYHDHHHWLTGWLRRKLGCPESAADLAQDTFIRVLAARETPTLIEPRAFLT
TVAKRVLFNYYRRQDLERAYLDALAQLPEHVAPSEEERAILLQTLLELDQLLNGLPRQVK
RAFLLAQLDGLTYAQIGAELGISIATVKRHLNKAAMRCYFAL
NT seq
489 nt
NT seq
+upstream
nt +downstream
nt
ttgcagccgtccaacaccgtcgaagtcctgtaccacgaccatcaccactggctcaccggc
tggttgcgacgcaagctcggctgccctgaaagtgccgcggacctggcgcaagacaccttt
atccgggtgctggccgcacgggaaaccccaaccctgatcgaaccccgcgccttccttacc
accgtggccaagcgtgtcctgttcaactactaccgtcgccaggacctggaacgcgcctac
ctcgacgccttggcgcaactgcccgagcacgtagcgccttcggaagaagaacgcgccatc
ctcctgcaaaccctgctcgagctggaccaactgctcaacggcctgccgcgtcaagtcaaa
cgcgccttcctgctggcccagctcgacggcctgacctacgcgcaaatcggcgcagaactg
ggcatctcgattgccaccgtcaaacgccacctgaataaagcagccatgcgttgctacttt
gccctatga
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integrated database retrieval system
