Pseudomonas palleroniana: LDL65_16870
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Entry
LDL65_16870 CDS
T09728
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
ppae
Pseudomonas palleroniana
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
AAA
AAA_16
AAA_19
OKR_DC_1_N
TIP49
IstB_IS21
AAA_22
TP_0454_N
HTH_24
APS_kinase
nSTAND3
AAA_2
DUF3410
AAA_7
MCM
Motif
Other DBs
NCBI-ProteinID:
UOP08770
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Position
3686994..3688391
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AA seq
465 aa
AA seq
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MTHNVLVVDDEPKLCDLLSSALSQNGIQVFTASNGLHALKVLEQEDIDLVISDWRMPGMD
GPALLAEIKVRFPDLPVIVMTAYSTVKNAVQSMRNGAYDYIAKPFDIDELDITVAKALQF
RDILRDNARLRAELDHHAQFDSLVGESPAFRQVLHAIDSVRDSNATILLTGESGTGKEMV
ARAIHKHGSRADKPFVAVNCAAIPEGLLESEMFGHRKGAFTGAVSDRVGRFQQADKGTLF
LDEVGDMPLALQAKILRALQERVIEPVGDPRERKVDVRVIAATNKNLLDAVANKEFREDL
YYRLNVFPIPLPPLRDRAEDIVPLARHFAETLSATAGKRITGFSPEALQAMAAYNWPGNI
RELQNCVERATIVAAKPVIEDIDLPAYLFASKPTEGGVTAVLSEGLGVPQDLDAALAEVE
KAYILAALQESNGVQAAAAAKIGISERSFWYRLKKLGIQVEKIIR
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgacgcataacgtattggtagtcgacgacgagcccaagctgtgtgatttgttgtcgtct
gccttgagccagaatggcatccaggtgttcaccgcgagcaacggcctgcatgcgctcaaa
gtgctggagcaggaagacatcgacttggtgatcagtgactggcgcatgccgggtatggat
gggccggcactgctggccgagatcaaggtgcgttttccggacctgccggtgatcgtgatg
acggcctacagcacggtgaaaaatgccgtgcagtcgatgcgcaatggcgcctatgactac
atcgccaagcccttcgacatcgacgagctggacatcaccgtggccaaggctttgcagttt
cgcgacatcctgcgcgataacgcgcggctgcgtgccgagctggatcaccatgcccaattc
gacagcctggtgggcgagagcccggcctttcgccaggtgctgcacgcgatcgactcggta
cgcgacagcaatgcaaccatcctgctgaccggcgaaagcggcaccggcaaggaaatggtc
gctcgcgccattcacaagcacggcagccgggccgacaaaccgttcgtagcggtcaattgc
gcggcgatccccgaaggcttgctggaaagcgagatgttcggccatcgcaagggcgctttc
accggcgcggtcagtgaccgggtcgggcgcttccagcaggccgacaaaggcacgttgttc
ctggacgaagtgggcgatatgcccctggccttgcaggccaagatcctgcgtgcattgcag
gagcgggtgatcgagccggtgggtgatccacgcgagcgcaaggtcgacgtacgagtgatc
gccgcgaccaacaaaaacctgctggatgcggtggccaacaaagaattccgcgaagacctt
tactaccgtctcaacgtgttcccgattccgctgccgcccctgcgtgaccgtgccgaagac
atcgtgcccctggcccggcacttcgccgagaccctgagcgccaccgccggcaaacgcatc
accggcttcagcccggaggcgttgcaggccatggcggcctacaactggccgggcaatatc
cgtgaactgcaaaactgcgtggagcgcgcgaccatcgtggcggccaaaccggtgattgaa
gatatcgacttgccggcttacctgttcgcctccaagcccaccgagggtggcgtgacggcg
gtgctcagcgagggcctgggtgtgcctcaggacctggatgcggcgctggcggaggtggag
aaagcctacatcctggcggcattgcaagagagcaacggggtgcaggcagcggcggcggcg
aagatcgggatttctgaaagaagcttctggtatcgcctgaaaaaactgggcatccaggtg
gaaaagatcatccgctga
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