Pseudomonas palleroniana: LDL65_18265
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Entry
LDL65_18265 CDS
T09728
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ppae
Pseudomonas palleroniana
Pathway
ppae03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LDL65_18265 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppae03400
]
LDL65_18265 (ung)
Enzymes [BR:
ppae01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LDL65_18265 (ung)
DNA repair and recombination proteins [BR:
ppae03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LDL65_18265 (ung)
Prokaryotic type
LDL65_18265 (ung)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UOP09036
LinkDB
All DBs
Position
3976684..3977376
Genome browser
AA seq
230 aa
AA seq
DB search
MTDGDRIKLEPSWKHALRDEFEQPYMAQLREFLRQEHAAGKEIYPPGPLIFNALNSTPLD
QVKVVILGQDPYHGPGQAHGLCFSVQPGVPTPPSLVNIYKELKRDLNIDIPNHGCLQSWA
DQGVLLLNTTMTVERANANAHAGKGWQFFTDRIIEVVSQHQPHLVFLLWGAHAQSKQKLI
DATKHLVLTSVHPSPLSAYRGFLGCGHFSRANKFLEQNGETPIDWRLPPI
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacggcgaccgtatcaaactcgaacccagctggaaacacgccctgcgcgacgaa
ttcgaacagccctacatggcccagttgcgcgagttcctgcgccaggaacatgcggccggc
aaagagatctacccgcccggcccgctgattttcaatgcgctcaattccacgccgctggac
caggtcaaggtggtgatcctgggccaagacccgtaccacggccccggccaggcccatggc
ttgtgcttctcggtacaaccgggcgtgccgacgccgccgtcgctggtcaatatctataaa
gagctcaagcgcgacctgaacatcgacatccccaaccacggctgcctgcaaagttgggcc
gaccagggcgtgctactgctcaacaccaccatgaccgtcgagcgcgccaatgccaacgcc
catgccggcaagggctggcagttctttaccgatcggattatcgaagtggtcagccagcac
caaccgcacctggtgttcctgctgtggggcgcgcatgcccagagcaagcagaagctgatc
gatgccaccaagcacctggtgctgacctcggtgcatccctcgccgttgtcggcgtatcgc
gggttcctggggtgtgggcacttcagccgtgccaacaagtttcttgagcagaatggcgag
acgccgattgattggcggttgcctccaatctga
DBGET
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