Pseudomonas palleroniana: LDL65_19080
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Entry
LDL65_19080 CDS
T09728
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
ppae
Pseudomonas palleroniana
Pathway
ppae00071
Fatty acid degradation
ppae00280
Valine, leucine and isoleucine degradation
ppae00310
Lysine degradation
ppae00362
Benzoate degradation
ppae00380
Tryptophan metabolism
ppae00410
beta-Alanine metabolism
ppae00640
Propanoate metabolism
ppae00650
Butanoate metabolism
ppae00907
Pinene, camphor and geraniol degradation
ppae00930
Caprolactam degradation
ppae01100
Metabolic pathways
ppae01110
Biosynthesis of secondary metabolites
ppae01120
Microbial metabolism in diverse environments
ppae01200
Carbon metabolism
ppae01212
Fatty acid metabolism
Module
ppae_M00087
beta-Oxidation
ppae_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ppae00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
LDL65_19080 (fadB)
00650 Butanoate metabolism
LDL65_19080 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
LDL65_19080 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
LDL65_19080 (fadB)
00310 Lysine degradation
LDL65_19080 (fadB)
00380 Tryptophan metabolism
LDL65_19080 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
LDL65_19080 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
LDL65_19080 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
LDL65_19080 (fadB)
00930 Caprolactam degradation
LDL65_19080 (fadB)
Enzymes [BR:
ppae01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
LDL65_19080 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
LDL65_19080 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
LDL65_19080 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
LDL65_19080 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
UOP09192
LinkDB
All DBs
Position
4134035..4136182
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDAIKADASVKGVIVSS
GKDVFIVGADITEFVDNFKLPDAELVAGNLEANKIFSDFEDLNVPTVAAINGIALGGGLE
MCLAADFRVMSATAKIGLPEVKLGIYPGFGGTVRLPRLIGADNAIEWIAAGKENKAEDAL
KVGAVDAVVAPGKLAEAALNLIKGAISGEFDYKAKRQPKLEKLKLNAIEQMMSFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIGLFLNDQEL
KKKAKAYDEIAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVEAQVK
DDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSELAIATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYEAKRLGQKNGKGFYAYEADKKGKQ
KKVADPSVHEVLAPVIYEQREVSDEDIINWMMIALCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADQYADLGPLYHPTAKLREMAKNGQRFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaactg
aaattcgacctcaagggtgagtccgtcaacaagttcaaccgtctaaccctgaacgaactg
cgtcaggccgtagacgccatcaaagcagatgcttcggtcaagggcgtgatcgtttccagc
ggcaaggacgtgttcatcgtcggcgctgacatcaccgaattcgtcgacaacttcaagctg
cccgatgccgagctggtggctggcaacctcgaagccaacaagattttcagcgatttcgaa
gacctcaacgtgcctaccgttgccgcgatcaatggcatcgcgttgggcggcggcctggaa
atgtgcctggccgcagacttccgcgtcatgtcggccaccgccaagatcggcctgcctgaa
gtcaaactgggcatctatccgggctttggcggcaccgtgcgtctgccgcgcctgatcggt
gccgacaacgccatcgagtggatcgccgccggtaaggaaaacaaggctgaagacgcgctg
aaagtcggtgccgtcgacgccgtggttgcgccgggcaagctggccgaagccgcgctgaac
ctgatcaagggcgccatcagtggcgaatttgactacaaggccaagcgtcagccgaagctg
gaaaaactcaagctcaacgccatcgaacagatgatgtcgttcgaaaccgccaaaggcttc
gtggctggccaggccggcccgaactatcctgcgccggttgaagcgatcaagacgatccag
aaagccgcgaatttcggtcgcgacaaagccctggaagtggaagcggcgggcttcgtcaaa
ctggcgaaaacctcggcggcccagagcctgatcggcttgttcctgaacgaccaggaactg
aagaaaaaggccaaggcctacgacgagatcgccaaggacgtgaaacaggccgccgtactc
ggcgccggtatcatgggtggcggtatcgcctatcagtcggcgtccaaaggcacgccgatc
ctgatgaaggacatcaacgagcacggtatcgagcaaggcctggcggaagccgccaaactg
ctggtaggccgtgtggacaaaggccgtatgaccgccgcgaagatggctgaagtgcttaac
ggcattcgtcctacgctgtcctacggtgatttcggccacgtcgacctggtagtcgaagcc
gttgtcgagaacccgaaggtcaagcaagccgtgctggctgaagtggaagcccaggtcaag
gacgacacgatcctggcctcgaacacttcgaccatttccatctcgctgctggccaaggcc
ctcaagcgtccggaaaactttgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtgatccgtggcgagaagtccagcgagctggccattgccaccaccgttgcc
tacgccaagaaaatgggcaagaacccgatcgtggtcaacgactgcccgggcttcctggtc
aaccgcgtgctgttcccgtacttcggtggtttcgccaagttggtcagcgccggcgtggac
ttcgtgcgtattgacaaggtcatggaaaaattcggctggccgatgggcccggcgtacctg
atggacgtggtcggcatcgacaccggccaccacggtcgcgatgtgatggctgagggcttc
ccggaccgcatgaaggacgaccgccgctcggcgatcgacgcgctgtacgaggccaagcgc
ctgggccagaagaacggcaagggcttctatgcctacgaggccgacaagaagggcaagcag
aagaaagtggccgacccgtcggtgcacgaagtgctggctccggtcatctacgaacagcgt
gaggtgtcggacgaggacatcatcaactggatgatgatcgccctgtgcctggaaaccgtg
cgttgcctggaagatggcattgttgaaaccgccgccgaagccgatatgggcctggtgtac
ggtattggtttccctccattccgtggtggtgcgctgcgttacatcgactcgatcggtgtg
gccgagttcgttgccctggctgatcaatacgctgatctgggcccgctgtaccacccgacc
gcgaagctgcgtgaaatggccaagaacggccagcgcttcttcggttaa
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