Pseudomonas palleroniana: LDL65_20150
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Entry
LDL65_20150 CDS
T09728
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
ppae
Pseudomonas palleroniana
Pathway
ppae00020
Citrate cycle (TCA cycle)
ppae00190
Oxidative phosphorylation
ppae00650
Butanoate metabolism
ppae00720
Other carbon fixation pathways
ppae01100
Metabolic pathways
ppae01110
Biosynthesis of secondary metabolites
ppae01120
Microbial metabolism in diverse environments
ppae01200
Carbon metabolism
Module
ppae_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ppae_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ppae_M00149
Succinate dehydrogenase, prokaryotes
ppae_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
ppae00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LDL65_20150 (sdhA)
00650 Butanoate metabolism
LDL65_20150 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
LDL65_20150 (sdhA)
00720 Other carbon fixation pathways
LDL65_20150 (sdhA)
Enzymes [BR:
ppae01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
LDL65_20150 (sdhA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
DAO
Pyr_redox_2
GIDA
FAD_binding_3
Thi4
PAC_bac
FAD_oxidored
Pyr_redox_3
NurA
Motif
Other DBs
NCBI-ProteinID:
UOP09398
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Position
4355129..4356901
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AA seq
590 aa
AA seq
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MANIPTISFDAIIIGGGGAGMRAALQLAQGGHKTAVITKVFPTRSHTVSAQGGITCAIAS
ADPNDDWRWHMYDTVKGSDYIGDQDAIEYMCQEGPAAVFELDHMGLPFSRTEQGRIYQRP
FGGQSKDYGKGGQAARTCAASDRTGHALLHTLYQGNLKAGTTFLNEYYAVDLVKNADGAF
VGVIAICIETGETTYIRANATVLATGGAGRIYASTTNALINTGDGVGMALRAGVPVQDIE
MWQFHPTGIAGAGVLVTEGCRGEGGYLINKHGERFMERYAPNAKDLAGRDVVARSMVKEI
IAGNGCGPNGDHVLLKLDHLGEEVLHSRLPGICELSKTFAHVDPVVAPVPVVPTCHYMMG
GVPTNIHGQAITQNADGQDEIIHGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRAAGLH
LEKALTDGIHYDDATEADINRAMARLNALNERTDGEDVATLRRELQSCMQNYFGVFRTGE
YMQKGIAQLADLRKRIANVKINDKSKAFNTARIEALELQNLLEVAEATAIAAEVRKESRG
AHAREDFEDRDDENWLCHTLYFPGDKRVTKRAVNFSPKTVPTFEPKIRTY
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggctaacattccaactatttccttcgacgccatcattattggtggcggcggtgcgggc
atgcgcgcagcgctgcaactggcccagggcggtcacaagactgccgtgatcaccaaggtg
ttcccgactcgttcccacaccgtatcggcccagggtggcatcacttgcgccatcgcctcc
gccgacccgaacgatgactggcgctggcacatgtacgataccgtcaagggttccgactac
atcggtgaccaggacgctatcgaatacatgtgtcaggaaggcccggccgcggtgttcgag
ctggaccacatggggctgccgttttcccgtaccgagcaaggccgtatctaccagcgtcca
ttcggcggtcagtcgaaggattacggcaagggcgggcaggctgcccgtacctgtgccgct
tccgaccgtaccggtcacgcgctgctgcacaccctttatcagggcaacctgaaagccggt
accacgttcctgaacgagtactacgcggtggatctggtgaagaacgccgacggtgcattc
gtcggcgtgatcgccatctgcatcgaaaccggtgaaaccacctacatccgcgccaacgct
accgttctggcgacagggggcgcaggccgtatctacgcttcgaccaccaacgccctgatc
aacaccggtgacggcgtcggcatggctctgcgtgctggcgtgccggtacaagatatcgaa
atgtggcagttccacccgaccggtattgccggcgccggtgtactggtgaccgaaggttgc
cgtggtgaaggtggttacttgatcaacaagcatggcgagcgtttcatggagcgttacgct
ccgaacgccaaagaccttgccggtcgtgacgtcgtggcccgttcgatggtcaaggaaatc
atcgccggtaacggctgtggcccgaatggcgaccacgtactgctgaaactcgatcacctg
ggtgaagaagtactgcacagccgcctgccaggtatctgcgaactgtccaagactttcgcc
cacgttgacccggtagttgccccggttccggttgttccgacttgccactatatgatgggc
ggcgtgccgaccaacattcacggccaggcgatcacccagaatgccgacggccaggacgag
atcatccacggtctgttcgccgtaggcgaagtggcttgcgtatcggtacatggcgccaac
cgtctgggcggcaactcgctgctcgacctggtggtattcggccgcgctgccggcctgcac
ctagaaaaggcgctgaccgacggtatccattacgacgacgcgaccgaggccgacatcaac
cgggccatggcgcgcctgaacgctctgaacgagcgtaccgatggcgaagacgtggctacc
ctgcgtcgcgagctgcaaagctgcatgcagaactacttcggtgtattccgtaccggcgaa
tacatgcagaagggtattgctcagctggctgacctgcgcaagcgcatcgccaacgtcaag
atcaacgataagagcaaggcgttcaacactgcccgtatcgaagcccttgagctgcaaaac
ctgctggaagtggctgaagcgactgcgatcgccgccgaggttcgtaaagaatcccgcggt
gcccacgcccgtgaagactttgaagaccgcgacgacgaaaactggttgtgccacaccctg
tacttcccgggtgacaagcgcgtaaccaagcgtgccgtgaacttctcgccgaagacggtt
ccgacgtttgaaccgaagattcggacttactaa
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