KEGG   Pseudomonas palleroniana: LDL65_20270
Entry
LDL65_20270       CDS       T09728                                 
Name
(GenBank) AMP-binding protein
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
ppae  Pseudomonas palleroniana
Pathway
ppae00061  Fatty acid biosynthesis
ppae00071  Fatty acid degradation
ppae01100  Metabolic pathways
ppae01212  Fatty acid metabolism
ppae02024  Quorum sensing
ppae04146  Peroxisome
Module
ppae_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:ppae00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    LDL65_20270
   00071 Fatty acid degradation
    LDL65_20270
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    LDL65_20270
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    LDL65_20270
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:ppae01004]
    LDL65_20270
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ppae04147]
    LDL65_20270
Enzymes [BR:ppae01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     LDL65_20270
Lipid biosynthesis proteins [BR:ppae01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   LDL65_20270
Exosome [BR:ppae04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   LDL65_20270
  Exosomal proteins of breast cancer cells
   LDL65_20270
SSDB
Motif
Pfam: AMP-binding AMP-binding_C_3 AMP-binding_C HTH_21
Other DBs
NCBI-ProteinID: UOP09422
LinkDB
Position
4383311..4384960
AA seq 549 aa
MPVAFRLPLQVFFEREARHPRKPFLVQPIGGGEVQTLTWGDVGHQARCAAHWLRARALPQ
GSHIALISKNCAHWIIADLAIWMAGHVSVPLYPNLTADSVAHVLTHSEAALVLIGKLDDW
PAMAPGIPAGLSTVRLPLAPAGDFDFTWADLLACSPIQDNPEPDAERLATIIYTSGTTGL
PKGVMQTFGALGFAATRGTELFGLGEDDRLLSYLPLCHVAERMFVELASIYTGQTVFFAE
SLETFLTDLRRARPTALFGVPRIWTKLQMGVYGKVSQKRLDRLLRLPFIGSYVGRKVLSG
LGLDALRIALSGAAPVPEALLRWYQRLGLDVLEVYGMTESCGYSHVCRPGQQTLGWIGPP
CPGVEVRIDPLGEVQVRSGATMLGYFKDAQKTAETLTNDGFLRTGDKGEQDAAGRLRLTG
RLKEIFKTSKGKYVAPAPIENRLAEHPRIEQVCVVGEGLSAPIGLCVLAAAGEERQALRD
SLECWLEQVNQALDKPERLRQLVVVKDSWAVENGFLTPTLKIKRSVIESTYGAQLHAWSE
RGESILWQD
NT seq 1650 nt   +upstreamnt  +downstreamnt
atgccagtcgcttttcgtttgccgttgcaggtcttcttcgaacgtgaagcgcggcatccg
cgcaaaccctttctcgtgcagcccatcggcgggggcgaggtgcaaaccctgacctggggc
gacgtcggccatcaggcccggtgcgccgcacactggctgcgtgctcgggcgttgccgcag
ggctcgcacattgccctgatctcgaaaaactgtgcgcactggatcatcgccgacctggcg
atctggatggccgggcatgtctcggtgccgttgtaccccaacctgacggccgactccgtg
gcccatgtgctgacccattccgaggcagcattggtgttgatcggcaagttggacgactgg
ccggccatggcgcccggtatcccggccggtttgtcgactgtccgtctgccgctggccccg
gccggcgacttcgatttcacttgggccgatctgctggcctgttcacccattcaagataac
cccgagcccgacgccgaacgcttggccacgatcatctatacctccggcaccaccggcttg
cccaagggagtgatgcaaaccttcggcgccttgggctttgccgccacccggggcaccgag
ttgtttggcctgggggaggacgaccggctgctgtcgtacctgccgttgtgccacgtggcg
gagcgcatgttcgtcgaactcgcgtcaatttataccgggcaaacggtatttttcgctgaa
agcctcgagacctttctgaccgacctgcgccgggcccggccgacagcgctgttcggagtg
ccgaggatctggaccaagctccagatgggggtgtacggcaaggtttcacaaaagcgtctg
gaccggctgttgcgcctgcctttcatcgggtcgtacgtgggccgcaaggtgttgtcgggt
ctgggcctggacgccctgcgtattgcgctatccggtgcggcgccggtgcctgaggcgttg
ctgcgctggtatcagcgcctggggctggatgtgctcgaggtgtatggcatgacggaaagt
tgcggctattcccatgtgtgccgcccggggcaacagacactgggctggatcggcccgcca
tgccctggggtggaagtgcgcatcgacccgttgggcgaagtgcaggtgcgcagcggcgcg
accatgctcggctacttcaaggacgcgcagaaaaccgccgagactctcaccaatgacggt
tttctgcgcaccggcgacaagggtgagcaggacgcggccggccgcttgcgcctgaccggg
cggctcaaggagatcttcaagaccagcaaggggaagtacgtggctccggcgccgattgaa
aaccgcctggccgaacatccacgcatcgagcaggtgtgcgtggtcggcgaagggctgagc
gcgccgataggcttatgcgtactcgcggcggcgggcgaggagcgccaagctctgcgcgat
agcctggaatgctggctggaacaggtcaaccaggcgctggacaagcctgagcgtctgcgc
caactggtggtggtcaaagacagttgggccgtcgaaaacggtttcctgaccccgaccctg
aagatcaagcgcagtgtgatcgaatcgacctatggtgctcaattgcatgcttggagcgag
cgcggcgaatcgattctgtggcaggattag

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