Pseudomonas palleroniana: LDL65_21770
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Entry
LDL65_21770 CDS
T09728
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ppae
Pseudomonas palleroniana
Pathway
ppae02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppae00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LDL65_21770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppae03021
]
LDL65_21770
Transcription machinery [BR:
ppae03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LDL65_21770
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Sigma70_ECF
GerE
TnsD
PhyR_sigma-like
Motif
Other DBs
NCBI-ProteinID:
UOP09693
LinkDB
All DBs
Position
complement(4783976..4784491)
Genome browser
AA seq
171 aa
AA seq
DB search
MSETCSDDHNHHLRAIEALYSGHHGWLYATLKRKLGNAMDAADLAQDTFTRILASQVTVI
ERPRAYLSCVAKGILVNWYQRKALERAYLDALAHAPQHEAPSPESHFLVLETLHEIDAML
DALPPMVKRAFLLSQINGLKYHDIAVQLDVSLITVKRYMKQAFLQCLMWVE
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaacctgttccgacgatcacaaccaccacctgcgcgcgatcgaggcgctttac
agcgggcaccacggctggttgtacgccactctgaaaagaaaactcgggaatgccatggat
gcggcggatctggcccaggacaccttcactcgcatcctcgcctcccaagtcactgtcatc
gagcggccacgggcttacttgagctgcgtggccaagggcatcctggtcaattggtaccag
cgcaaggcattggaacgcgcctacctggatgcgctcgcccatgcgccgcagcacgaggcg
ccttcgccggaatcgcactttctggtgctggagaccctgcatgaaatcgatgcgatgctc
gacgcgctgccgcccatggtcaaacgtgctttcctgctgtcgcagatcaacggcctcaaa
taccacgacatcgccgtgcaactggacgtgtcgctgatcaccgtcaagcgctacatgaaa
caagccttcctgcaatgcctgatgtgggtcgaatga
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