Pseudomonas palleroniana: LDL65_26975
Help
Entry
LDL65_26975 CDS
T09728
Symbol
tssK
Name
(GenBank) type VI secretion system baseplate subunit TssK
KO
K11893
type VI secretion system protein ImpJ
Organism
ppae
Pseudomonas palleroniana
Pathway
ppae02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
ppae00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
LDL65_26975 (tssK)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppae02044
]
LDL65_26975 (tssK)
Secretion system [BR:
ppae02044
]
Type VI secretion system
Imp/Vas secretion system core components
LDL65_26975 (tssK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
UOP10672
LinkDB
All DBs
Position
complement(6000626..6001954)
Genome browser
AA seq
442 aa
AA seq
DB search
MQVHKVIWQEGMLLRPQHLQHNDRYYQQQLNRTRLLGNDAWGFLTLELNEQYLNLGKLVI
NQASGVLPDGSFFDLSAVMEPLVLDVPADSGKHAVYLALPLATGNQVETRQPSQSEVLAR
YIACEVEVGDSNAGMGSPCRINCARPDLRLLLDEGESDTGFVKLKVAQVLVSSGEGGLSL
DREFMPAFIFVQDCGYVSSCLQEVIRLLASRGDAIAARMCGEGTAAGSHVGDFLMLQVIN
RTELELRHYLSQPLVRPETLFRALVSLLGELSTFTHDSKRAHLDVHYQHADQAGSFRGLM
AQVRAALSVVLEQHAVELTLQQRQYGVLVCPVSDLKLLGTATFILAATAQCDSEELRNRL
PAHLKVGPVERIRELVNLHLAGIKVKPLPVAPRQIPFHAGKTYFMLDMNAHDIAQLEQSG
GFAFHVGGDFAGIELNFWAIRN
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgcaggttcacaaagtcatctggcaggaaggcatgctgttacggccgcagcacttgcag
cacaacgaccgctattaccagcagcaactcaaccgcacgcgcttgttgggcaatgatgcc
tggggcttcctgacgctggaactcaatgagcagtacctcaacctgggcaagctggtgatc
aaccaagccagtggcgttttgccggatggcagcttcttcgacctgagcgcagtcatggag
cctctggtgctggacgtgcctgcagattcgggcaaacacgcggtttacctggcgctcccc
ctggccaccggcaatcaggttgaaacccgtcaaccgtcccagagcgaggtgctggcccgc
tatatcgcctgtgaagtcgaagtgggggattcgaacgccggcatgggttccccttgccgg
atcaactgcgcacgccccgatttgcgccttctgctggacgaaggggagagcgatacgggc
ttcgtgaaactcaaggtcgcccaggtactggtgtcgtcgggtgaaggtggtttgagcctg
gacagggagttcatgccggcctttatttttgtgcaggactgcgggtatgtgtcgtcgtgc
ctgcaggaggtcatcagactgctggccagtcgaggggatgccattgctgcgcggatgtgc
ggcgagggtacggcagccggaagccatgtgggcgatttcctgatgctgcaagtgatcaat
cgcaccgagctggagttgcgtcattacttgagccagcctttggtgcgccctgagacgctg
ttccgggcactggtgtcgttgcttggtgagttatcaacgttcacccacgacagcaagcgt
gcccacctggacgtgcattaccagcatgctgaccaggcaggcagcttccgcggcctgatg
gcgcaagtgcgtgccgcgttgtcggtcgtgctcgaacagcacgccgtcgagctgacgttg
cagcaacgtcaatacggggtgttggtctgcccggtgagcgacttgaaattgctcggcact
gcgacattcatcctggcggcgactgcgcaatgtgactctgaggaactgcgcaatcggctg
ccggcccatctgaaagtcggccccgtcgaacgcatccgtgagctggtcaacctgcatctg
gcaggcatcaaggtcaagccattgcctgtggcaccgcgacagattccatttcatgccggc
aagacctatttcatgctcgatatgaatgcccacgacatcgcgcagctggagcagtcaggt
ggcttcgctttccatgtaggcggggattttgccgggattgaactcaacttctgggccatt
aggaattga
DBGET
integrated database retrieval system
