KEGG   Pseudomonas palleroniana: LDL65_27000
Entry
LDL65_27000       CDS       T09728                                 
Name
(GenBank) AAA family ATPase
  KO
K11907  type VI secretion system protein VasG
Organism
ppae  Pseudomonas palleroniana
Pathway
ppae02025  Biofilm formation - Pseudomonas aeruginosa
ppae03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ppae00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    LDL65_27000
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    LDL65_27000
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ppae02044]
    LDL65_27000
Secretion system [BR:ppae02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   LDL65_27000
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 AAA_16 ClpB_D2-small AAA_22 Clp_N NBD_SMAX1 AAA_7 TniB AAA_25 IstB_IS21 AAA_30 Sigma54_activat AAA_29 nSTAND3 NACHT ResIII TsaE T2SSE DUF815 Hpr_kinase_C SLFN-g3_helicase DUF3349
Other DBs
NCBI-ProteinID: UOP10676
LinkDB
Position
complement(6005390..6007816)
AA seq 808 aa
MMNVDLQQLIRTLTAQARQDLERAAERCVMRGGREVLVEDLLLALLEHPEGVMAKALADA
NVNAGELHAALQPRSEQSATRNPVFAQALVCWLQQALMVAHVELGQSFVDHGALLLALLR
HPLEYAGSGYHEVLSRVDADRVRDFLTSQPAETEPVASASLLQRFTHDLTRQAREGLIDP
VLCRDGEIRQLIEILVRRRKNNPMLVGEAGVGKTAIVEGLARQIVASQVPAALKGVRLLT
LDMGLLLAGASLKGEFERRLKGLIDEVNESPEPVILFIDEAHTLTGAGAQAGGADAANLL
KPALARGALRTIAATTWSEYKQYIEKDPALARRFQPVSVDEPSVEAAVSILRGVVPVYEE
SHGVYVRDDAVVAAAHMSARYLVGRQLPDKAVDVLDTACAAVRTRQAMPPEALQKLCVEL
GEGRRQQRALSRDTDLGLPVDTQALQALNLRLEALERQHQALEQSCGQPTRNLEVCPHQV
ARVISAWTGIPVEQLALEPDEKILGLAGALRKRILGQEHAVQALDRALRAVAAGLNNADA
PAGVFLLVGPSGVGKTETALALADLLYGGERFVTTINMSEYQEKHTLSRLIGAPAGYVGY
GEGGVLTEAVRQRPYSVVLLDEVEKADPEVLSLFYQVFDKGRANDGEGREIDFRNTLLLL
TSNLGSDRISELCGDGRRPEPQVLQDAIYPVLRNHFKPALLARMRVVPYYPLSGDVLGDV
AKLKLANVGTRLHQRKLAFTYTPELVAHMTERCADGDSGARYIDQWIERHLLPQMVDGLL
DATARDEAMSRVHASLDGSGWPTCEFSQ
NT seq 2427 nt   +upstreamnt  +downstreamnt
atgatgaatgtggacctgcaacaactgatccgcaccttgacagcccaggcacgccaggac
ctggagcgcgcggccgagcggtgcgtgatgcgcggcggtcgtgaagtgttagtggaagat
ttgctcctggccttgcttgagcatcccgagggagtaatggccaaggcgttggcagacgcc
aatgtcaacgccggtgagctgcatgcagccttgcagccccgcagtgagcagagtgcaacc
cgcaacccggtcttcgcgcaggcactggtgtgttggctgcagcaggcattgatggttgct
catgttgagttggggcagtctttcgtggaccacggcgcattgttgctggcactcctgcgt
cacccactggagtacgcgggcagtggttatcacgaggtactgagccgcgtggatgcagat
cgggtacgtgattttctgacgagccagcctgccgaaaccgaaccggtagccagcgcttct
ctactgcagcgttttacccatgacctgacccgacaggcgcgtgaagggttgatcgacccg
gtgctgtgccgtgatggggaaatccgccagttgatcgagatcctggtacgacgacgcaag
aacaacccgatgctggttggagaggccggagtgggcaaaacggcgatcgtcgaagggctt
gctcggcagatcgttgcttcgcaggtgcctgcggctctgaaaggggttcgcttactgacc
ctggatatgggcttgttactggcaggcgccagcctcaagggcgaattcgaacggcgtctc
aaaggcctcatcgatgaagtgaatgaatcgccggagccggtgatcctgtttatcgacgag
gcccataccctgaccggtgccggggcacaggcgggcggtgccgatgcggcaaacctgctc
aagccggcgctggcgcggggagccttgcggaccatcgccgccaccacctggtcggagtac
aagcagtacattgagaaggacccggcgttggcgcggcgcttccagccagtgtcggtcgat
gaacccagtgtcgaggcggcggtgtccatcctgcgtggagtggttcctgtttatgaggaa
agccacggcgtttatgttcgcgatgatgctgtcgtcgcggcagcgcatatgagcgctcgc
tatctggtggggcggcagttgccggacaaggctgtggatgtgctggacactgcctgtgcc
gcggttcgcacgcgccaggcaatgccacctgaggcgttgcagaaactgtgtgtggagctg
ggcgaaggtcgacgccaacagcgggcgttaagtcgagacaccgacctcggattgcccgtg
gatacccaggcgctgcaagccttgaacctgcgtcttgaagcgcttgagcgacagcatcag
gcgttggagcagtcgtgcgggcaacccactcggaaccttgaggtgtgcccgcatcaggtg
gctcgcgttatcagcgcctggaccggcatcccagtcgagcagttggcccttgaaccggat
gaaaaaatcctcggcctggccggcgccctgcgtaagcgcatcctgggacaggagcacgcg
gtgcaagcccttgaccgcgctttacgtgctgttgccgccggcctgaacaacgcggatgcg
cccgcaggcgtatttttgttggtggggccgagcggtgtcggcaagactgaaacggcactg
gccctggcggatcttttgtatggcggcgagcgttttgttaccaccatcaatatgtccgaa
taccaggagaagcacacgctctcgcgcttgatcggggcgcctgcgggttatgtcggttac
ggcgaaggtggggtgctgacggaggccgtacgccagcgcccttactcggtggtgttgctc
gacgaggtagagaaagccgacccggaggtgttgagcctgttttaccaggttttcgacaaa
gggcgcgccaacgatggcgaggggagggagatcgattttcgcaatacgttgctcctgctg
acctccaacctcggcagtgaccgcatcagtgaactgtgtggcgatggacgccggcctgag
ccccaggtgctgcaagacgcgatctaccccgtcttgcgcaaccacttcaagccggccttg
ttggcacggatgcgcgtcgtgccgtattacccgctctcaggcgacgtgttgggtgatgta
gcgaaactcaagctggcgaatgtgggcacacgcttacatcaacgcaagcttgcattcacc
tacacacctgagttggttgcgcatatgaccgagcgttgcgccgatggggacagcggtgcg
cgatacatcgatcaatggattgagcgccacttgctgccacagatggtggacggccttctc
gacgctacggctagggatgaggcgatgtcccgggtgcatgcgagcctcgatgggagtggc
tggcccacctgcgagttcagccaatga

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