Pseudomonas palleroniana: LDL65_27425
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Entry
LDL65_27425 CDS
T09728
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ppae
Pseudomonas palleroniana
Pathway
ppae03030
DNA replication
ppae03430
Mismatch repair
ppae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LDL65_27425
03430 Mismatch repair
LDL65_27425
03440 Homologous recombination
LDL65_27425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppae03032
]
LDL65_27425
03400 DNA repair and recombination proteins [BR:
ppae03400
]
LDL65_27425
Enzymes [BR:
ppae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LDL65_27425
DNA replication proteins [BR:
ppae03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LDL65_27425
DNA repair and recombination proteins [BR:
ppae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LDL65_27425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
Motif
Other DBs
NCBI-ProteinID:
UOP10759
LinkDB
All DBs
Position
complement(6101859..6102713)
Genome browser
AA seq
284 aa
AA seq
DB search
MDFTVIDVETSNPNLASICQIGVAVFRGGKLHESWGSLVNPNDYFHPMNIAVHGIDENMI
SAAPYWAEVYQRVLPFVAGKIVVSHTPFDRTATFRANQSAGLPIFDCSWLDTSRVARRAW
SQFSQSGYGLRNLASHFGIAFQHHDAVEDARAAGEILLRAIADTGSTIAEWCSLVHQPLS
PDSISSVARVASFEGVLSGNVVVFTGALSIPRQHAADLAAAAGCDVGVGVTRHTTLLVVG
DQDINRLAGMERSSKHRKAEELIAKGQKIRILGESDFQALLQPT
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggatttcacagtcattgatgtggagacgtcaaacccgaacctggcgagcatttgtcag
ataggtgtcgcagtttttcggggcggaaagctccatgaatcatggggttcactggtcaat
ccaaatgattattttcatcccatgaacatagctgtgcatgggatcgacgaaaatatgatt
tcggcagcgccatactgggctgaggtctaccagcgagttttaccattcgtcgccggaaaa
attgttgttagccatactcccttcgatcgaacagccaccttccgagcaaatcagagtgct
ggccttccgatttttgattgttcctggctcgacacctctcgtgttgcacgtagggcttgg
agtcagttttcccagtctggttacggcctcaggaacttagcatcccatttcgggattgcc
tttcaacatcacgacgctgttgaggatgctcgagcagcgggggagatattgctccgcgca
attgctgacaccggttcaacgattgctgagtggtgctctttggttcaccagccattgagc
cctgattcaatatcttctgtagcgcgtgtcgcgagctttgagggcgtgctctcggggaac
gttgttgtgtttaccggcgctctctccattcctcggcagcatgccgcagatctagcagca
gctgctggatgcgatgtaggcgtaggcgtgaccaggcacaccactctgctcgttgtgggg
gaccaagatataaacagattggcaggcatggaacggagttctaagcatagaaaagctgaa
gagctcattgcaaaggggcaaaaaattcgaattctgggcgaaagcgattttcaagccttg
ctacagccgacttaa
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