Pelagovum pacificum: I8N54_00125
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Entry
I8N54_00125 CDS
T06971
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
ppaf
Pelagovum pacificum
Pathway
ppaf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
I8N54_00125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppaf03400
]
I8N54_00125
Enzymes [BR:
ppaf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
I8N54_00125
DNA repair and recombination proteins [BR:
ppaf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
I8N54_00125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
RPW8
CDH1_2_SANT_HL1
Motif
Other DBs
NCBI-ProteinID:
QQA43023
LinkDB
All DBs
Position
24281..24523
Genome browser
AA seq
80 aa
AA seq
DB search
MSDKPVEEMTFEEAMKELEAVVSRLEHGDVPLEESISLYERGAALKARCSEKLKEAEEKV
AKLTLDADGRPKGTEPLDAG
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacaaacccgtcgaggagatgaccttcgaagaggcgatgaaagagctcgaagcc
gtcgtgtcgcggctggagcatggtgacgtgccgctcgaggagtcgatctctttgtacgag
cgcggcgcggccctgaaggcgcgctgctcggaaaagctgaaggaagccgaagagaaggtg
gccaagctgacgctcgacgccgacggccgcccgaaaggcaccgagcctctcgatgccggc
tga
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