Pelagovum pacificum: I8N54_00165
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Entry
I8N54_00165 CDS
T06971
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
ppaf
Pelagovum pacificum
Brite
KEGG Orthology (KO) [BR:
ppaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppaf03032
]
I8N54_00165
03036 Chromosome and associated proteins [BR:
ppaf03036
]
I8N54_00165
03400 DNA repair and recombination proteins [BR:
ppaf03400
]
I8N54_00165
DNA replication proteins [BR:
ppaf03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
I8N54_00165
Chromosome and associated proteins [BR:
ppaf03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
I8N54_00165
DNA repair and recombination proteins [BR:
ppaf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
I8N54_00165
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_euk_2
DUF2267
HU-HIG
HU-CCDC81_bac_2
SasG_E
Motif
Other DBs
NCBI-ProteinID:
QQA43031
LinkDB
All DBs
Position
32263..32550
Genome browser
AA seq
95 aa
AA seq
DB search
MAKPMTKTQLVAALAEEMGSDKKTATAALDAVTGVITKEVSGGGAVTLPGVGKIYCRERP
ERMVRNPATGEQIKKDADKVVKMTIAKALKDSVNS
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaacccatgaccaagacccaactcgtcgccgctctggccgaagagatgggcagc
gacaagaaaaccgcgaccgccgcgcttgatgccgtgaccggcgtcatcaccaaggaagtg
tccggcggcggtgccgtcacgctccccggcgttggcaagatctactgccgcgagcgcccc
gagcgcatggtccgcaacccggccaccggcgagcagatcaagaaagacgcggacaaggtc
gtcaagatgaccatcgcgaaggccctgaaggacagcgtcaacagctga
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