Pelagovum pacificum: I8N54_01025
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Entry
I8N54_01025 CDS
T06971
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
ppaf
Pelagovum pacificum
Brite
KEGG Orthology (KO) [BR:
ppaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppaf03036
]
I8N54_01025 (smc)
Chromosome and associated proteins [BR:
ppaf03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
I8N54_01025 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
SMC_hinge
ABC_tran
AAA_29
GBR2_CC
Motif
Other DBs
NCBI-ProteinID:
QQA43185
LinkDB
All DBs
Position
205651..209106
Genome browser
AA seq
1151 aa
AA seq
DB search
MRFTRLRLNGFKSFVDPTDLVIAEGLTGVVGPNGCGKSNLLEALRWVMGENRPTAMRGGG
MEDVIFAGAATRPARNHAEVSLVIDNQDRLAPAGFNDSDLLEITRRITRDVGSAYKVGPK
DVRARDVQMLFADAATGSTSPALVRQGQISELINAKPKNRRRILEDAAGIAGLYQRRHEA
ELKLNNAEQNLARVDDVIEQLAGQLGQLARQAKQAARYREIGEALRKAEGALFYRRWKEA
AAALSAAEAGLRDATVGAARAETGARTATKAREEAEAALPALREEEAIAAAVLQRLVVER
DGLADEEKRARSTIEALEGRIAQLSRDMDREAGLNKDAGETIAGLEAEAAELAKAGEGHE
GRLTEAQEKATEAASILRDREGDLTRLTEDMARLSARHQAAHRLVEDNRKTLTRSEAEAA
KAQDAMDGASKALAGSEDALTEARAKEEQARTTAQNAEETLTAADTARAETQAREAEARA
ERSAAEGEASALRAEVSALTRLVDRDSADGAQLVDQVEVRPGYEQALGAALADDLRAPVV
GEEAVSGWVALPGYARPETLPDGAVALTNYVSVPGVLVRRMGQVGLVDADDGARLQAELK
PGQRLVSIEGDLWRWDGFRAGAADAPSAAALRLQQLNRLTELKKDLEEVTARAEGAARAH
ESLSTRLADLTAADKRAREARREADRNVADAARALSRAEADRDLAEGRVENLGLARRRHE
DEAQSARAALAEAEAALKDLGDLDAARAEVEAVKTTVEAARIAMMSRRSALDELRREGES
RARRAQDVAKEVNSWRTRLDNASSRASELADRKAEAEEELASAAGRPDQIAAKREELSTA
HADADKRRQASSDKLAEAETILRDATLAEREAERAASEAREGRARAETRVEAAKEAVATA
AARTEEALEMAPQALVEALGLDPEALGNAEAVEAEVNRLKRQRDALGAVNLRAEEDAKEV
QEEHDKLVADKDDLEEAIRTLRSGIASLNREGRERLLTAFEEVNRSFTTLFTHLFGGGEA
NLVLVESDDPLEAGLEIMCQPPGKKLSTLSLLSGGEQTLTALALIFAVFLANPSPICVLD
EVDAPLDDANVTRFCDLLDEMTRRTETRFLIITHHAVTMSRMDRLFGVTMGEQGVSQLVS
VDLKRAEALVA
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcttcacacggctcaggctgaacggcttcaagtccttcgttgacccgaccgacctc
gtcatcgccgaggggctgacgggcgtcgtggggccgaacggctgcggcaagtcgaacctg
cttgaggcgctgcgctgggtaatgggcgagaaccgcccgacggcgatgcgcggcggcggt
atggaagacgtgatcttcgctggtgccgccacccggccggcccgcaaccatgccgaggtg
tcgctcgtcatcgacaaccaggaccgcctcgcgcccgccgggttcaacgacagcgacctg
cttgagatcacgcgccggatcacccgcgacgtcgggtccgcctacaaggtcggcccgaaa
gacgtgcgggcgcgcgacgtgcagatgctgttcgctgacgccgcgaccggctcgacctcg
cccgcactggtgcgccagggccagatcagcgagctcatcaacgccaagccgaagaaccgc
cgccgcatcctcgaggacgccgccgggatcgccggcctctaccagcgccggcacgaggcg
gagctgaagctgaataacgccgagcaaaacctcgcccgcgtcgacgacgtgatcgaacag
ctcgccggacagctcggccagcttgcgcggcaggccaagcaggccgcccgctaccgggag
atcggcgaggcgctgcgcaaggccgagggcgcgctgttctaccgccgctggaaggaagcc
gccgccgcgctctcggccgccgaggcggggcttcgcgatgccaccgtcggcgccgcgcgg
gccgagaccggcgcgcgcaccgccaccaaggcccgggaagaggcggaagcggccttgccc
gccctgcgcgaagaagaagcgatcgcggcagccgtgctgcaacgcctcgtggtcgaacgc
gacggtctcgccgacgaggaaaagcgcgcccgttccaccatcgaggcgctcgaaggccgc
attgcgcaactgtcgcgcgacatggaccgggaagccgggctgaacaaggacgcgggcgaa
acgatcgccggtctggaggcagaggccgcagagctcgccaaggccggcgaggggcacgag
ggccggctgaccgaagcgcaggagaaggcgaccgaggccgccagcatcctgcgcgatcgt
gagggcgacctcacccgcctgaccgaggatatggcccggctctccgcccgccatcaggct
gcgcaccggctggtcgaggacaatcgcaagaccctgacgcggagtgaggccgaagctgcc
aaggcgcaggacgcaatggacggtgcctccaaggcgctcgccgggtccgaggacgcactg
accgaagctcgcgccaaggaggagcaggcacgcacgaccgcgcagaacgccgaggaaacg
ctgaccgccgccgacaccgcccgcgccgaaacgcaggcccgcgaggcggaggcgcgcgcc
gaacgttccgccgccgaaggcgaggcgagcgcgctgcgcgccgaagtctccgcgctcacc
cggcttgtggaccgcgactccgccgacggcgctcagcttgtcgaccaggtcgaggtccgg
ccgggctatgaacaggcgttgggcgctgccctcgctgacgatctccgcgcccctgtcgtg
ggcgaggaggcggtctcgggctgggtggccctgccaggatatgcccggcccgagacccta
ccggatggcgcggtcgcgctgaccaactacgtttccgtccctggtgtcctcgtgcgccgg
atggggcaggtgggactggtggacgccgatgatggtgcgcgccttcaggccgagctgaag
ccgggacagcggctggtgtcgatcgaaggcgatctctggcggtgggacgggtttcgcgcc
ggcgccgccgacgcgccctccgccgccgcgctgcggctgcaacagctgaaccggctcacg
gaattgaagaaggatctcgaagaggtcaccgcccgcgccgagggcgccgcgcgagcccac
gagtcgctctccacccgcctcgccgacctgaccgctgccgacaagcgggcgcgcgaagcg
cggcgcgaggccgatcgcaacgtcgccgacgccgctcgcgccctcagccgcgcggaagcc
gaccgcgatctcgccgagggtcgggtcgagaacctcgggctcgcccgccgccgtcacgag
gacgaagctcaatccgcccgtgccgcgctggccgaggccgaggcggccctcaaagacctc
ggtgatctcgacgcagcgcgtgccgaagtggaggcggtcaagacgaccgtcgaagccgcc
cgcatcgcgatgatgtcccgccggtccgcactcgacgaacttcgtcgcgaaggggaaagc
cgggcccgccgggcgcaggacgtcgcgaaagaggtgaacagctggcgcacccggctcgac
aacgcgtcgtcccgcgcgtccgagttggccgaccgcaaggcggaagcggaggaagagctc
gcctctgccgccggacgccctgaccagatcgccgcaaagcgcgaggagctgtcgaccgct
cacgccgatgcggataagcgccggcaggcgtcgtccgacaagctggccgaggccgagacg
atcctgcgcgacgccacacttgccgaacgtgaggccgaacgcgctgcgtcggaggcccgc
gaaggccgtgcccgcgccgaaacccgtgtcgaagcggcgaaagaggctgtcgccaccgcc
gccgcccgcaccgaggaagcgcttgagatggccccgcaggcgctggtcgaagcgcttggg
ctggaccccgaggcgctcggcaacgcagaggccgtggaagccgaggtgaaccggctgaaa
cgccagcgcgacgcgctcggcgcggtgaacctgcgggcggaggaagacgccaaggaagtg
caggaggagcacgacaagctcgtcgccgacaaggatgacctcgaagaggcgatccgcacc
ctgcgcagcggcatcgccagcctgaaccgcgaggggcgcgaacgtcttctgacagccttc
gaggaggtgaaccgcagcttcaccacgctcttcacgcacctgttcggcggcggtgaggcg
aacctcgttctggtcgaaagcgacgaccccctcgaagcggggctcgagatcatgtgccag
ccgccgggcaagaaactgtcgaccctgtccctgctttccgggggcgaacagacgctgacc
gcgcttgcgctgatcttcgcggtgttccttgccaacccctcgccgatctgcgtgctggac
gaggtcgatgcgccgctcgatgatgccaacgtcacccgcttctgcgaccttctggacgag
atgacgcgccgcaccgagacgcgcttcctcatcatcacgcaccacgccgtgacgatgagc
cggatggaccgcctgttcggcgtgacgatgggcgagcagggcgtcagccagctcgtttcc
gtcgatctcaagcgggctgaggcgctggtcgcctga
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