Pelagovum pacificum: I8N54_02215
Help
Entry
I8N54_02215 CDS
T06971
Name
(GenBank) alpha-N-arabinofuranosidase
KO
K01209
alpha-L-arabinofuranosidase [EC:
3.2.1.55
]
Organism
ppaf
Pelagovum pacificum
Pathway
ppaf00520
Amino sugar and nucleotide sugar metabolism
ppaf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppaf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
I8N54_02215
Enzymes [BR:
ppaf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.55 non-reducing end alpha-L-arabinofuranosidase
I8N54_02215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-L-AF_C
Glyco_hydro_39
Motif
Other DBs
NCBI-ProteinID:
QQA43410
LinkDB
All DBs
Position
419616..421127
Genome browser
AA seq
503 aa
AA seq
DB search
MDARVTAHRRYTIADIDKRLYGSFLEHLGRAIYTGIYEPGHPTADGNGMRKDVIDLVREI
DTPICRYPGGNFVSAYNWEDGIGPKEDRPTRLDLAWHTSESNEVGIHEFAEWAEAANTEM
MLAVNLGSRGLDEARAFLEYVNHPGGSYWSDLRKKNGRADPWDVKVWCLGNEMDGPWQVG
HKSAEEYGHLANETAKAMRAFDKNLELIVCGSSSAQMPTYPQWESTVLDATYDNVDFISL
HMYFANHEKNTAEYLAIPERLDKYIGTVSGVIDYIKGKKRSKKDVKISFDEWNVWYHSNE
QDKKILQGQSGWPHAPALLEDIYNFEDVLQVGCALNTFIRRADRVKIACIAQLVNVIAPI
MTSEGGAAWRQTIYWPFMFASRYGRGTALQLDVDVPSYDADIASDVKYLDIAGTYDDDAG
SMTFFAVNRHPTEALETSVSLEGFAAAKSVEHTLVKHDDLEAVNTEDNPDNVSPTEGSGA
KLDGNKLSMTLPPYSYSMIRVKL
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggacgccagggtcacggcgcaccgccgctacacaatcgccgacatcgacaagcgcctg
tacggctcgttcctcgagcatctcggtcgcgcgatctacaccggcatctacgaacccggc
cacccgacggccgacggcaacgggatgcgcaaggacgtcatcgacctcgtccgcgagatc
gacaccccgatctgccgctaccccggcgggaacttcgtctccgcctacaactgggaagac
ggtatcggcccgaaagaggatcgcccgacgcggctggacctcgcgtggcacacctcggaa
agcaacgaggtcggcatccacgaattcgccgagtgggctgaagccgccaacaccgagatg
atgctcgctgtgaacctcggctcgcgcgggctggacgaggcacgcgccttcctcgaatac
gtgaaccaccccggcggctcctactggtccgaccttcgcaagaagaacggccgcgccgat
ccgtgggacgtcaaggtctggtgcctcggcaacgagatggacggcccctggcaggtcggt
cacaagtcggccgaggaatacggccaccttgccaacgagaccgcgaaggccatgcgcgcc
ttcgacaagaacctcgagctgatcgtctgcggttcgtcatcggcgcagatgccgacctac
ccgcagtgggaatccactgttctcgacgcgacctacgacaacgtcgatttcatttcgctg
cacatgtacttcgccaaccacgagaagaacacggccgagtacctcgccatccccgagcgg
ctcgacaagtacatcggcacggtcagcggcgtcatcgactacatcaagggcaagaagcgc
tccaagaaagacgtcaagatcagcttcgacgagtggaacgtctggtatcactcgaacgag
caggacaagaagatcctgcagggccagtccggctggccgcacgccccggcgctgcttgag
gatatctacaacttcgaggacgtgctgcaggtcggctgtgcgctgaacaccttcatccgc
cgtgcggaccgggtgaagatcgcctgtatcgcccagctggtgaacgtgatcgcgccgatc
atgacctccgaaggcggcgccgcctggcgccagacgatctactggcccttcatgttcgcc
tcccgctatggccgcggcacggcgctgcagctcgacgtcgacgtgcccagctacgacgcc
gacatcgcgtccgacgtgaagtacctcgacatcgccgggacctatgatgacgacgccggc
agcatgaccttcttcgcggtgaaccgtcacccgaccgaagcgctcgagacgtcggtgtcc
ctcgaagggttcgccgcggcgaaatcagtcgagcacacgttggtcaagcacgacgatctg
gaagcggtgaacaccgaggacaacccggacaacgtttctcccacggagggaagcggcgcg
aaactggacggtaacaagctgtcgatgacgctgccgccctattcctactcgatgatccgc
gtgaagctctga
DBGET
integrated database retrieval system