Pelagovum pacificum: I8N54_04225
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Entry
I8N54_04225 CDS
T06971
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ppaf
Pelagovum pacificum
Pathway
ppaf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppaf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
I8N54_04225
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppaf02000
]
I8N54_04225
Transporters [BR:
ppaf02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
I8N54_04225
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
GYF_2
Motif
Other DBs
NCBI-ProteinID:
QQA43791
LinkDB
All DBs
Position
complement(824237..825814)
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AA seq
525 aa
AA seq
DB search
MTLFKWTRRALMATGMASAIALAAGAPAIAQTPPGVLVVGQIAEPKSLDPQAVTAANDFR
ILVNVYDGLVGYESGTLNIEPKLATDWEISEDGLEYTFNLREGVTFHDGTPFNAEAVVFT
FERMLNEDHPYADTGPFPLAFYFSAVDSVEAVDDLTVKFTLNEPFAPFMSNLASPTGAIV
SPTAVEENGADFGRNPVGTGPFTFIEWQSNEAVVVEANPDYWNGAPELQAVVFRPLTDAN
TRVAEMLSGGIDVMVEVPPNSLGEFQDDTYDIYEAAGPHLWFLILNLKEGPFTEQAVRQA
ANYAINKESLVEDILEGTAQVAAGPTPPAFGWAYNEELQPYAYDPDKARELLAEAGMENP
EVTFYVTEGGSGMLDPIAMGTAIQADLEAVGFDVNIETYEWNTFLGEVNPGLEGKADMAE
MAWMTTDPDTLPFLALRSEAWPDQGGFNSGYYSNPEVDELLNEARVATSQDERADLYKQM
QQIVYDDAPWVFVANWVQNAVASDRVGNFELQPSFYLLLEDVTKE
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgaccctattcaaatggacgcgccgcgcgctgatggccaccggaatggcctcggccatc
gctctcgccgccggtgcgcccgcgatcgcacagacgcctccgggtgtgctggtcgtcggc
cagatcgccgagccgaagtcgctcgatccgcaggcggtgaccgcggcgaacgacttccgc
atcctcgtcaacgtctacgacgggctcgtcggctacgagagcggcacgctcaacatcgag
cccaagctcgccaccgattgggagatcagcgaggacgggctggagtacactttcaacctg
cgcgagggcgtgacctttcacgacggcactccgttcaacgccgaggccgtggtcttcacc
ttcgagcggatgctgaacgaggatcacccctacgccgacaccggcccgttcccgctcgcc
ttctacttctcggcggtcgacagcgtcgaggccgtggacgacctgaccgtgaagttcacc
ctgaacgagcccttcgcgcccttcatgtcgaacctcgcctcgcccaccggcgccatcgtc
tcgcccactgcggtcgaggagaacggcgcggacttcggccgcaacccggtcggcaccggc
cccttcaccttcatcgaatggcagtcgaacgaggcggtcgtcgtcgaggcaaaccccgac
tactggaacggcgcgccggagctgcaggccgtggtgttccgcccgctgaccgacgccaac
acccgcgtcgccgagatgctgtcgggcgggatcgacgtgatggtcgaggttccgccgaac
tcgctcggcgagttccaggacgacacgtacgacatctacgaggcggccggcccgcacctg
tggttcctcatcctgaacctgaaggaaggcccctttaccgagcaggccgtccggcaggcc
gcgaactacgcgatcaacaaggaatcgctggtcgaggacatcctcgaaggcaccgcccag
gtcgcggcgggcccgactccgccggcgttcggctgggcctacaacgaagaactgcagccc
tacgcctacgatcccgacaaggcgcgtgagctgctcgccgaggccggaatggagaatccc
gaagtcaccttctacgtgaccgagggcgggtccggcatgctcgacccgatcgccatgggc
accgccatccaggcggacctcgaggccgtcggcttcgacgtcaacatcgagacctacgag
tggaacaccttcctcggcgaagtgaatccggggctcgagggcaaggccgacatggccgaa
atggcgtggatgacgaccgaccccgacaccctgcccttcctcgcgctgcggtccgaagcc
tggccggaccagggcggcttcaactcgggctactactccaaccccgaggtcgacgagctt
ctgaacgaggcccgcgtcgcgaccagccaggacgagcgcgcggacctctacaagcagatg
cagcagatcgtctacgacgacgcaccgtgggtcttcgtggccaactgggtgcagaacgcc
gtcgccagcgatcgtgtcggcaacttcgaactgcagccctccttctacctcctcctcgag
gacgtgacgaaggaatga
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