Pelagovum pacificum: I8N54_05940
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Entry
I8N54_05940 CDS
T06971
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
ppaf
Pelagovum pacificum
Brite
KEGG Orthology (KO) [BR:
ppaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppaf03400
]
I8N54_05940 (radA)
DNA repair and recombination proteins [BR:
ppaf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
I8N54_05940 (radA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
AAA_16
AAA_22
AAA
AAA_24
nSTAND3
NTPase_1
AAA_30
AAA_5
SLFN-g3_helicase
RecA
MeaB
KdpD
MCM
NACHT
DAP3
zf_C2H2_ZHX
Motif
Other DBs
NCBI-ProteinID:
QQA44117
LinkDB
All DBs
Position
complement(1176313..1177677)
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AA seq
454 aa
AA seq
DB search
MAKSPSFVCTACGATTSKWSGRCETCGAWNTIEEVKPLSDGPGGKALGKSRGTPLTLTDL
SSAEKEPPRTVSGVTELDRVLGGGLVKASAVLVGGDPGIGKSTLLLQAAARFARGGMKVM
YISGEESAGQIQMRAQRLGLTESPVQLAAATNLRDILTTLEAEAPDLAVIDSIQTMWLDT
VDSAPGSVSQVRSAAHELTSFAKRRGISMVLVGHVTKEGQLAGPRVVEHMVDTVLYFEGE
RGHQFRVLRAHKNRFGPADEIGVFEMTGRGLIEVKNPSALFLSERGEPAPGSAVFAGIEG
SRPVLCEFQALVAPSPTSQPRRSVLGWDGGRLAMILAVLESRCGVAFAGLDVYLNVAGGL
RISDPAADLAVAAALMSAREDAALPSDAAIFGEISLSGAIRPVAQTENRLKEAQKLGFTQ
AILPQARKRGGESGLELRHMADLPAFVEALFGER
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggccaagtccccctccttcgtctgtaccgcctgcggcgccaccacctccaaatggtcc
ggccggtgcgaaacatgcggcgcctggaacaccatcgaagaggtgaaaccgctctccgac
gggccgggcggcaaggcgctcggcaagtcacggggcacgccgctgacgctcaccgacctg
tcgagcgccgagaaggaaccgccgcgcaccgtctccggcgtgaccgagctcgaccgcgtg
ctcggcggggggctggtgaaggcgagcgcggtgctggtcggcggcgatccggggatcggc
aagtcgaccctgctgctacaggccgccgcccgcttcgcgcggggcggcatgaaggtgatg
tatatctcgggcgaagagtcggccggccagatccagatgcgcgcccagcgcctcggcctg
accgaaagcccggtgcagctcgccgccgccaccaacctgcgcgacatcctcaccacgctc
gaggcggaggcccccgacctcgcggtgatcgattcgatccagacgatgtggctcgacacc
gtcgacagcgcgcccggctccgtcagccaggtccgctccgccgcgcatgaactgacgagc
ttcgccaagcggcgggggatctcgatggtcctggtcggccacgtgacgaaggaaggccag
ctcgcaggccctcgcgtggtcgagcacatggtcgacacggtgctctatttcgagggcgag
cgcggccaccagttccgggtgctgcgcgcccacaagaaccgcttcggcccggccgacgag
atcggcgtcttcgagatgaccggtcgcgggctgatcgaggtgaagaacccctctgccctg
ttcctgtccgaacggggcgagcccgcgccgggatcggccgtcttcgccgggatcgagggc
tcccgcccggtgctctgcgaattccaggcgctggtcgcgccctcccccaccagccagccg
aggcgcagcgtgctcggctgggacggcgggcggctcgcgatgattctcgccgtgctcgaa
agccgctgcggcgtcgccttcgccggtctcgacgtctacctgaacgtcgcgggaggcctg
cgcatctccgatcccgccgccgatctggccgtcgcggctgcgctgatgtccgcccgtgag
gacgcggcgctgccctcggatgcggcgatcttcggcgaaatcagtctctccggtgccata
cgtcccgtcgcccagaccgaaaaccggttgaaggaagcgcagaaacttggttttacgcag
gccatcctgccgcaggcccggaaacggggcggcgaatccggtctcgagttgcgccacatg
gccgacctgcccgcgttcgtcgaagccctgttcggcgagcggtaa
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