Pelagovum pacificum: I8N54_06170
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Entry
I8N54_06170 CDS
T06971
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
ppaf
Pelagovum pacificum
Pathway
ppaf00470
D-Amino acid metabolism
ppaf00550
Peptidoglycan biosynthesis
ppaf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppaf00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
I8N54_06170
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
I8N54_06170
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppaf01011
]
I8N54_06170
Enzymes [BR:
ppaf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
I8N54_06170
Peptidoglycan biosynthesis and degradation proteins [BR:
ppaf01011
]
Precursor biosynthesis
Amino acid ligase
I8N54_06170
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
2-Hacid_dh_C
MurD-like_N
KARI_N
F420_oxidored
TrkA_N
Peptidase_M17_N
NAD_binding_2
Dehyd-heme_bind
AdoHcyase_NAD
Motif
Other DBs
NCBI-ProteinID:
QQA44162
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All DBs
Position
1226853..1228250
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AA seq
465 aa
AA seq
DB search
MIPVSGVDGERIAVLGLGRSGRTTAAALRAGGATVVAWDDGPAGRAAAEAEGIELRDLAR
DGAMSDVAALIVSPGIPHLYPAPHPAIAAAWEAGVPVDNDIGLFFRSFGTEEWMRFDQPP
KVIAVTGSNGKSTTAALIQHVLTEAGRESQLAGNIGRGVLDIDPPGDGGVVVLELSSYQT
DLARSLTPDVAVFTNLSPDHLDRHGGMGGYFAAKRRLFAEGGPDRCIIGVDEAEGQYLAN
QLSESRADDRVIRVSVTRKLPEGWTVTARKGYLAENRKGRQVGAIDLRSIPGLPGAHNHQ
NACAAYAVARTLGLAPRVIEGAFASYPGLPHRSQLIAERRGVRFVNDSKATNVDSAVKAL
MAFDRVRWICGGLEKAGGLAALLPATGSVVKAYVIGREAESFATQLKGVDAEVCTTMAQA
VARAAEEAEEGEVVLLAPAAASFDQYDSFEKRGDDFAAQVAALGV
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgatacctgtcagcggagtcgacggcgagcggatcgccgtgctcggattgggccgttcc
ggtcggacgacagccgccgccctgcgcgccggcggtgcaacggtcgtcgcatgggacgac
gggccggctggccgcgccgcggcagaggccgagggcatcgagctgcgcgacctcgcccgc
gacggcgcgatgtcggatgtcgccgcgctgatcgtctcgcccggcattccgcacctctac
cccgcgccgcaccccgccatcgcggcggcgtgggaggcgggcgtccccgtcgacaacgac
atcggcctgttcttccgctccttcggcacggaggagtggatgcgcttcgaccagccgccg
aaggtgatcgccgtcaccggatcgaacggcaagtccaccacggcggcgctgatccagcat
gtcctgaccgaggcgggccgcgagagccagctggccggcaacatcgggcgcggcgtgctc
gacatcgacccgcccggcgacggcggtgtcgtggtgctggagctgtcctcctaccagacc
gacctcgcgcggtcgctgacgcccgacgtggcggtcttcacaaacctcagccccgatcac
ctcgaccggcacggcgggatggggggctatttcgcggccaagcgccggctgttcgcggaa
ggcggccccgaccgctgcatcatcggcgtggacgaggcggaggggcagtaccttgccaac
cagctttccgaaagccgcgccgatgaccgggtgatccgggtgtccgtcacccgtaagctg
cccgagggctggaccgtgacggcgcgcaagggctacctcgccgagaaccgcaagggccga
caggtcggcgcgatcgacctgcgctccattccggggctgcccggcgcgcacaaccaccag
aatgcctgcgcggcctacgcggtcgcccggaccctcggcctcgccccgcgggtgatcgag
ggcgccttcgccagctacccgggcctgccgcaccgctcgcaactgatcgccgaacggcgc
ggcgtgcgcttcgtcaacgacagcaaggcgaccaacgtcgacagcgcggtgaaggcgctg
atggccttcgaccgggtgcgctggatctgcggcggtctggagaaggcgggcggcctcgcc
gcgctgctgcccgcgacgggctccgtcgtgaaggcctacgtgatcggccgcgaggccgag
agcttcgccacgcagctgaaaggcgtggatgcggaagtctgcacgaccatggctcaggcc
gtcgcccgcgccgccgaggaggcggaggagggcgaagtcgtcctgctcgcccccgcggcg
gcgagcttcgaccagtacgacagtttcgagaaacgcggcgacgatttcgccgcgcaggtc
gccgcgctcggcgtgtga
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