Pelagovum pacificum: I8N54_07305
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Entry
I8N54_07305 CDS
T06971
Symbol
xylF
Name
(GenBank) D-xylose ABC transporter substrate-binding protein
KO
K10543
D-xylose transport system substrate-binding protein
Organism
ppaf
Pelagovum pacificum
Pathway
ppaf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ppaf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
I8N54_07305 (xylF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppaf02000
]
I8N54_07305 (xylF)
Transporters [BR:
ppaf02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
I8N54_07305 (xylF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
QQA44370
LinkDB
All DBs
Position
1475219..1476244
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AA seq
341 aa
AA seq
DB search
MNKTIIAAVVATVGFSSAALAQDLTVGVSWSNFQEERWKTDEAAIVAALDEAGAEYLSAD
AQSSSSKQISDVESLIAQGVDALIILAQDSQAIGPAVEAAAREGIPVVGYDRLIEDDRAF
YLTFDNVEVGRMQARAVLEAQPEGNYVMIKGSPTDPNADFLRGGQQEVLQDAIDSGAITI
VGEAYTDGWLPANAQRNMEQILTQADNEVDAVVASNDGTAGGAVAALTAQGMDGIPVSGQ
DGDHAALNRIAQGTQTVSVWKDARELGGRAAEIAVAMAEGTAMSDIEGAEEWTSPAGTTL
WAEFLEPVPVTADNLDVVVDAGWITQEALCQGVSGGPSPCE
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagacaattatcgctgccgtcgtcgcgacggtcggtttcagctcggcagcgctc
gcgcaggatcttacggtcggcgtgagctggtcgaacttccaggaagagcgctggaaaacg
gacgaggccgccatcgtggccgcgctcgacgaagctggcgccgaatacctgtccgccgac
gcgcaatcctcgtcctccaagcagatctccgacgtcgagtcgctgatcgcgcagggcgtg
gacgcgctcatcatcctcgcgcaggacagccaggcgatcggcccggcggtcgaggccgcg
gcccgcgaggggattccggtcgtcggctatgaccgcctgatcgaggacgaccgcgccttc
tacctgaccttcgacaacgtcgaagtcggccggatgcaggcccgcgctgtgctcgaagcg
cagcccgaaggcaactacgtcatgatcaagggctcgccgaccgacccgaacgcggacttc
ctccgcggcggtcagcaggaagtgctgcaggacgccatcgacagcggtgcgatcaccatc
gtgggcgaggcctacaccgacggctggctgccggcgaacgcgcagcgcaacatggaacag
atcctgacccaggccgacaacgaggtcgacgcggtcgtcgcctccaacgacggcaccgcc
ggcggcgctgtcgcggcgcttacggcacagggcatggacggcatcccggtctccgggcag
gacggcgaccacgcggcgctcaaccgcatcgcgcagggcacgcagaccgtttcggtctgg
aaggacgcccgtgaactcggcggccgtgcggccgagatcgccgttgcgatggccgaaggc
accgccatgagcgacatcgaaggcgccgaggagtggacctcccccgccggcacgacgctc
tgggccgagttcctcgagccggttccggtgaccgccgacaacctcgacgtcgtcgtcgac
gccggctggatcacccaggaagcgctctgccagggtgtttccggcggcccgtcgccctgc
gagtga
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integrated database retrieval system
