Pelagovum pacificum: I8N54_07650
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Entry
I8N54_07650 CDS
T06971
Name
(GenBank) efflux RND transporter permease subunit
KO
K18989
multidrug efflux pump
Organism
ppaf
Pelagovum pacificum
Brite
KEGG Orthology (KO) [BR:
ppaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppaf02000
]
I8N54_07650
Transporters [BR:
ppaf02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
I8N54_07650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
QQA44433
LinkDB
All DBs
Position
complement(1546238..1550038)
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AA seq
1266 aa
AA seq
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MTGIIDWAASRARMVIAFILLSILAGAAAYVGLPKEGEPDIEIPALFVSVPFQGISAEDS
ETLLVKPMETELSNLDGLKTMTSTASEGYAGVSLEFEFGWDKTQTMSDVRDAMNAAEGSF
PEGADNYTINEINFSEFPILIVNLTGRVPERTLLRVAKDLQDRLEGLEPVLSASMTGQRD
EMLEVTIDPLRLETYNVTANELVDVVVQNNQLIAAGEIETDQGAFSLKIPSSFDEPQDVY
DLVVKSDGDRQVTLGELADIRLTFEDRTSTARFDGVNTVALQVVKRKGFNIIDTSALVME
EVEAERAGWPEELRNAIQVGTSNDQSRTIASMVSQLEGSVLTAIALVMIVVLAALGTRPA
LLMGFAIPTSFLLCFAFLAIMEVTISNIVMFGLILAVGMLVDGAIVVVEYADKRISEGVG
PMHAYTEAAKRMFWPVVSSTATTLCAFLPMLFWPGVVGEFMGMLPVTLIFVLCASLIVAL
VFLPVMGGITGRMSRSFGHAADGLRRALPWVVRALLVPAAAALTFAGAMTTLNPLWLTGG
AVQTGGIVDSLPGIAMFLAGAILLSITLDAAAIHRQPKKISTKRGHTPFGWLIQFLTGNP
IMPLVAIGAVMAFVVGTFTYFGQNSNGVEFFADSEPEQSIVYVQARGNLSLAEKDALVRQ
AELAALDTTGVKTVFAFAGDGGLNSNTAGASGPADTIGQLQLELVPWEDRPDWVRTHEGV
TIDELDGNVVMDNLKAKLDEIPGIRTEILNLAMGPGSAKPVSLRLKGEDWEELTAATEEA
RARFESMPGLIAIEDTLPLPGIDWQIDVDVERAGQFGANVAAVGAMVQLVTRGILLDTMR
VDSSDEEVEIRVRFPEQDRTLSTLDTLRVRTADGLVPLSNFITRTPVEKLAQIDRIDQER
YFEVRADVEPGFFKVTLPPEAASDLPEGSDGALGFVRRIEGDVRIRDNGQPVLTAPDGVQ
YQLSHLNDGVTLAQLEEAIGGDARFVPVNPNERIGELTTWLDGDEALPGDISYEWAGDQA
DQEESQQFLVVAFAGAMGLMFIILLAQFNSFYNAVLVLLAVVLSTTGVLIGMLVMDQAFS
IIMTGTGIVALAGIVVNNNIVLIDTYQEYAAYMPRIQAIVRTAEERLRPVLLTTITTMAG
LTPMMFGLSIDFFGGGYSLGSPTALWWTQLATAVVFGLGIATVLTLIFTPSMLALRVWAT
TYARWIARFLARLSFGRGSKAAQDWALNREARRIKHPEIIWTPDEVAPAGPRDVTGQPML
PLRAAE
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
ttgaccggcatcatcgactgggccgcctcgcgtgcgaggatggtcattgccttcatcctg
ctttccatcctggccggtgcggcagcctacgtcggccttcccaaggaaggtgagcccgac
atcgagatccccgcgctcttcgtgtcggtgccgttccagggcatctccgccgaggacagc
gagacgctgctggtcaagccgatggaaaccgagctgtcgaacctcgacggcctgaagacc
atgacctccaccgcgtcggagggatatgccggtgtctcgctggagttcgagttcggctgg
gacaagacccagaccatgtcggacgtgcgcgacgcgatgaacgccgccgaagggtccttc
cccgaaggcgccgacaactacacgatcaacgagatcaacttctccgaattcccgatcctc
atcgtgaacctgaccggccgcgtgccggagcggacgctgctgcgcgtcgccaaggacctg
caggatcgtctcgaggggctggagccggttctctcggccagcatgaccggccagcgcgac
gagatgctcgaggtcacgatcgacccgctgcgtctcgagacctacaacgtcaccgcaaat
gagctggtcgacgtggtcgtgcagaacaaccagctgatcgccgcgggcgagatcgagacc
gaccagggggccttctcgctgaagatcccgtcgagctttgacgagccgcaggatgtctac
gacctcgtcgtgaaaagcgacggcgaccggcaggtcacgctgggcgaactcgccgacatc
cgcctcaccttcgaggaccgcacctccaccgcgcggttcgacggggtcaacacggtcgcg
ctgcaggtggtgaagcgcaagggcttcaacatcatcgacacctccgcgctcgtgatggag
gaagtcgaagccgaacgcgccggctggcccgaggaattgcgcaacgcgatccaggtcgga
acctcgaacgaccagagccgcaccatcgcctcgatggtcagccagctcgaaggctcggtg
ctgacggccatcgcgctcgtcatgatcgtcgtgctcgccgcgctcggcacccgccctgcc
ctgctgatgggtttcgcgatcccgacgtcgttcctgctctgcttcgcgttcctcgcgatc
atggaggtcacgatctccaacatcgtgatgttcggcctgatccttgccgtggggatgctg
gtcgacggggccatcgtcgtcgtcgaatatgcggacaagcgcatctccgagggcgtcggc
ccgatgcacgcctacaccgaggcggcgaagcggatgttctggccggtcgtctcctccacc
gcgacgacgctctgcgcctttctgccgatgctcttctggcccggcgtcgtgggcgaattc
atggggatgctccccgtgacgctgatcttcgtgctctgcgcctcgctgatcgtggcgctg
gtgttcctgcccgtgatgggcggcatcacgggccgcatgtcgcgcagcttcggccatgcg
gccgacgggctgcgtcgcgcgctgccctgggtcgtgcgggccctgctcgtacccgccgcc
gccgcgctgaccttcgcgggggcaatgacgacgctgaacccgctctggctgaccgggggc
gcggtgcagaccggtggcatcgtcgacagcctcccgggcatcgcgatgttcctcgccggg
gcgatcctgctgtccatcacgctggatgcggcggcgatccatcgccagcccaagaagatc
tcgaccaagcgcggccacacgcccttcggctggctgatccagttcctgaccggcaacccg
atcatgccgctcgtcgccatcggcgccgtgatggccttcgtcgtcggcaccttcacctac
ttcggccagaattcgaacggcgtggagttcttcgcagacagcgaaccggaacagtcgatc
gtctacgtgcaggcccgcggcaacctttcgcttgccgagaaggacgcgctggtccggcag
gccgaactcgccgcgctggataccaccggcgtcaagaccgtcttcgccttcgctggtgat
ggcggtctgaactccaacaccgcgggcgcgagcggcccggccgacacgatcggccagctt
cagctcgaactcgtgccctgggaagaccgcccggactgggtgcgcacccacgagggcgtc
accatcgacgagctcgacggcaacgtcgtgatggacaacctgaaggccaagctcgacgaa
atccccggcatccgtaccgagatcctgaacctcgccatgggccccggctccgccaagccg
gtgagtctgcgcctgaagggagaggactgggaagagctgaccgccgcgaccgaagaggcg
cgcgcccggttcgagtcgatgcccggccttatcgcgatcgaggatacgctccccctgccc
ggcatcgactggcagatcgacgtcgacgtcgaacgtgccggccagttcggcgccaacgtt
gccgccgtgggcgcaatggtccagctcgtcacgcgggggatcctgctcgacacgatgcgc
gtcgacagttccgacgaagaagtcgagatccgcgtccgcttcccagagcaggaccgcacg
ctgtccaccctcgacacgctgcgcgtccgcacggccgacggcctcgtgccgctgtcgaac
ttcatcacccgcaccccggtcgagaagctcgcccagatcgaccggatcgaccaggagcgc
tacttcgaggtccgcgcagacgtggagcccggcttcttcaaggtcacgctcccgccggaa
gcggcctccgacctgcccgagggtagcgacggggcgctcggcttcgtgcgccggatcgag
ggcgacgtgcgcatccgcgacaacggccagcccgtgctgaccgcccccgacggcgtgcag
tatcagctttcccacctcaacgacggcgtgacccttgcccagctggaagaggcgatcggc
ggcgacgcgcgcttcgtgccggtgaacccgaacgaacggatcggagagctgacgacctgg
ctcgacggggacgaggcgctgcccggcgacatctcctacgagtgggcaggcgaccaggcc
gaccaggaagagagccagcagttcctcgtcgtggcctttgcaggcgccatggggctgatg
ttcatcatcctgctcgcgcagttcaactcgttctacaacgccgtgctggtgctgctggcg
gtcgtgctgtcgaccaccggcgtgctgatcgggatgctggtcatggaccaggccttctcg
atcatcatgaccggcaccgggatcgtcgcgctcgcggggatcgtggtgaacaacaacatc
gtgctgatcgacacctaccaggaatacgcggcctacatgccccgtatccaggccatcgtg
cgcaccgccgaagaacgtctgcgtccggtgctgctgaccactatcaccacgatggcgggc
ctgacgccgatgatgttcggcctgtcgatcgacttcttcgggggtggctactcgctcggc
tcgccgacggcgctctggtggacgcagcttgcgaccgcggtcgtgttcggccttggtatc
gcgacggtgctgacgctgatcttcacgccgtccatgctggcgctgcgggtctgggcgacg
acctacgcccgctggatcgcccggttccttgcccggctgtccttcggccgcggcagcaag
gcggcgcaggactgggcgctgaaccgcgaggcacgacgcatcaagcaccccgagatcatc
tggacgccggacgaagtggcccctgccggcccgcgcgacgtgaccgggcagccgatgctg
ccgctgcgcgctgccgagtga
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