Pelagovum pacificum: I8N54_09875
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Entry
I8N54_09875 CDS
T06971
Name
(GenBank) substrate-binding domain-containing protein
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
ppaf
Pelagovum pacificum
Brite
KEGG Orthology (KO) [BR:
ppaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppaf03000
]
I8N54_09875
Transcription factors [BR:
ppaf03000
]
Prokaryotic type
Helix-turn-helix
LacI family
I8N54_09875
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
HTH_3
HTH_IclR
HTH_31
HTH_24
HTH_50
HTH_23
HTH_Crp_2
HTH_36
HTH_5
HTH_Tnp_ISL3
HTH_AsnC-type
MarR
Sigma54_DBD
HTH_26
I-HmuI_NUMOD-like
HTH_10
Motif
Other DBs
NCBI-ProteinID:
QQA44850
LinkDB
All DBs
Position
2008916..2009959
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AA seq
347 aa
AA seq
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MNLKQLAENLGLSQTTVSRALNGYPEVSEATRRRVVDAAELHNYRPNARAKGLATGQAMA
IGHVIPIDDKHEMVNPIFGDFLAGAGETYSSLGYEMVLSVVEPGDEATVYRTMRARGSVD
GVVVSAPRVSDGRLDLLDRLKMPYVVHGRVSEHEGDYSWLDVNNRSAFQRATNFLLDLGH
RRIALINGLEEMDFAWRRRRGYERAMEERGLSTEPGLMVANEMTERNGYLTASQMLSRDA
PPTAFLVSSLICALGVRRAIEERGLSMNRDVSVVTHDDALSYIDNGLDVPIFTATRSSVR
EAGRRTARMLIDRIDNPDLPHVHQLLEAQLVVGQSTGPFTASQGLKA
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcaagcaactggcagagaatctgggactgagccagaccacggtcagccgcgcg
ctgaacggctatccggaggtatcggaagcgacgcggcggcgcgtcgtggacgccgccgaa
ctgcacaattaccgccccaacgcccgcgccaagggcctcgccaccgggcaggccatggcg
atcggccacgtcatcccgatcgacgacaagcacgagatggtcaacccgatcttcggcgac
ttccttgccggcgcgggagagacctattcgagcctcggctacgagatggtgctgtcggtc
gtcgaacccggcgacgaggcgacggtctatcgcaccatgcgggcgcgcggctctgtcgac
ggcgtcgtggtcagcgcaccccgcgtcagcgacggccgcctcgacctgctcgaccggctc
aagatgccctacgtcgtccacggccgcgtcagcgagcacgagggcgactattcgtggctc
gacgtgaacaaccgctccgcgttccagagggcgacgaacttcctgctcgacctcgggcac
cggcgcatcgcactcatcaacgggctggaggagatggacttcgcatggcgccgccggcgc
ggctacgaacgcgcgatggaagagcgcgggctctccacggagcccggcctgatggtcgcc
aacgaaatgaccgagcggaacggctacctcaccgccagccagatgctgagccgggacgcg
ccgcccacagctttcctcgtctcctcgctgatctgcgcgctcggcgtgcgccgcgccatc
gaggaacgcggcctgtcgatgaatcgcgacgtgtcggtcgtgacccacgatgacgcgctg
tcctacatcgacaacggccttgacgtgccgatcttcaccgcgacccgctcctccgtccgc
gaggccgggcggcggaccgcacggatgctgatcgaccgcatcgacaatcccgacctgccc
cacgttcaccagctgctcgaagcgcagctggtcgtcggtcagtccaccggaccattcacc
gcttctcaaggacttaaagcatga
DBGET
integrated database retrieval system
