Pelagovum pacificum: I8N54_09945
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Entry
I8N54_09945 CDS
T06971
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
ppaf
Pelagovum pacificum
Brite
KEGG Orthology (KO) [BR:
ppaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppaf03036
]
I8N54_09945
Chromosome and associated proteins [BR:
ppaf03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
I8N54_09945
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Phage_int_SAM_5
Phage_int_M
Motif
Other DBs
NCBI-ProteinID:
QQA41160
LinkDB
All DBs
Position
2021181..2022110
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AA seq
309 aa
AA seq
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MTHWVQAFLEAQAAELDAATNTQLAYARDLKDFAGFLDTRGRHFADATQDDVEAYLIRCE
AEGLARATRARRLSAIKQLYRFAFEENWRGDNPAIRIAGPGRDKSLPTTLSIEEVDRLLE
AARAPGRDQLRNTCMMELLYATGMRVTELVTLPVSAARGDPRMLLVRGKGGKERMVPLSE
GARDATKAWLVERDAHEEVAKKKGITASRFLFPSRSKAGHLTRHRFFTLVKEIAVRGGVS
PAKVTPHTLRHAFATHLLAGGADLRSIQVMLGHADIGTTEIYTHVLDERLKELVLKHHPL
VSGKDGDTQ
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgactcactgggtacaggccttcctcgaagcacaggccgccgaactcgacgccgcgacg
aacacccagctcgcctatgcccgcgacctgaaggacttcgccggttttctcgacacgcgc
ggccgccacttcgccgatgccacgcaggacgatgtcgaggcctacctgatccgctgcgag
gcggagggtctcgcccgcgcgacacgtgcccggcgcctgtcggcaatcaagcagctctac
cgcttcgcgttcgaggagaattggcgcggcgacaatccggcgatccgcatcgccggacca
gggcgcgacaagtcgctgccgaccacgctctcgatcgaggaagtcgatcgcctgctggag
gccgcgcgcgcgccgggccgggaccagcttcgcaatacctgcatgatggagctgctctac
gcgacggggatgcgggtgaccgagcttgtcaccctgcccgtctcggccgcacggggcgat
ccgaggatgctgctggtgcgtggcaagggcggcaaggagcgcatggtgccgctctccgaa
ggtgcgcgtgacgcgaccaaagcctggcttgtcgagcgcgacgcacacgaagaggtcgca
aagaagaagggcatcaccgcctcgcgcttcctgtttccctcacgctccaaggccgggcac
ctgacccggcaccggttcttcacgctggtcaaggagatcgcggtgcgcggcggcgtctcg
ccggccaaggtcacgccacacacgttgcgccacgccttcgcgacgcatctgctggccggc
ggggcggatctgcgctcgatccaggtcatgctcggccatgccgatatcggcacgaccgag
atctacacgcacgtactggacgagcgtctgaaggagctcgtgctgaagcatcacccgctc
gtctccggaaaggacggcgacacccaatag
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