Pelagovum pacificum: I8N54_10720
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Entry
I8N54_10720 CDS
T06971
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ppaf
Pelagovum pacificum
Pathway
ppaf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppaf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
I8N54_10720
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppaf02000
]
I8N54_10720
Transporters [BR:
ppaf02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
I8N54_10720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
YqhI
Motif
Other DBs
NCBI-ProteinID:
QQA44965
LinkDB
All DBs
Position
2176269..2177879
Genome browser
AA seq
536 aa
AA seq
DB search
MHVEEVAEGKLSRREFLARSTSLGVTAATAYGLIGVAMPTPASAQDMPMGGTIRIQQDVR
ALTDPPTFSWPQIGNTVRGFLEFLVQYNADGTFEPRLLESWEVNDDATQYILHVRPGVTW
NDGRGELTAQDVAYNFTRWCDGNWEGNSMASRMAALQNEDGSGAAEGAIEVVDDLTVQLN
LTRPDITIIPAVTEYPAAIVPDGWSGSPADDPVGTGPYRLVELEIGVRAVLEKDPDHPWW
GEGAYVDRIEFIDYGTDGAAYVSAAEAGEIDMTYETVGEFVEIFQAIGWQESESVSANTL
TLRTNRLTEVNGETPYADARVRRALAMACDNQVLLELGYANRGTLAENHHVCPIHPEYAD
IGAPPYDPEGARALMEEAGMADYVHELISIDDDWRRNTSDALAAQLRDAGIQCERTVYPG
STFWNDWANFAFSSTDWGHRPLGVQIMALAYRSGVAWNETGLASEEFDSMLDEASAISDA
AARRDVMERIEKFLWEDGTIIQPYWRSLYRHARPGVIGGNSHPINEIHVHTLALES
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtggaagaagtggccgaaggcaagttgagccggcgcgagttcctcgcccgctcc
acctcgctcggcgtcaccgcggccaccgcctacgggctgatcggcgtcgcgatgccgacg
ccggcgagcgcgcaggacatgccgatgggcggcacgatccgcatccagcaggacgtccgc
gccctgacggatccgccgaccttcagctggccgcagatcggcaacaccgtacgcggcttc
ctcgagtttctcgtgcagtacaacgccgacggcacgttcgagccgcggttgcttgaaagc
tgggaagtcaacgacgacgcgacccagtacatcctgcacgtccgtccgggcgtgacctgg
aacgacggccggggcgagctgaccgcgcaggacgtcgcctacaacttcacccgctggtgc
gacggcaactgggaaggcaactcgatggcctcccgcatggccgcgctccagaacgaggac
ggctccggcgccgccgagggcgcgatcgaagtggttgacgaccttaccgtgcagctgaac
ctgacccggcccgacatcacgatcatccccgccgtgaccgagtacccggcggcgatcgtg
cccgacggctggtccggcagcccggccgacgatcccgtcggcaccgggccctaccggttg
gtcgagctcgagatcggcgtgcgcgccgtgctcgagaaggaccccgatcacccgtggtgg
ggcgaaggcgcctatgtcgaccggatcgagttcatcgactacggcactgacggtgcggcc
tacgtctccgccgccgaggccggcgagatcgacatgacctacgagacggtcggcgagttc
gtcgagatcttccaggcgatcggctggcaggaaagcgagtccgtctcggccaacactctg
acgctgcgcaccaaccgcctgaccgaggtgaacggcgagacgccttatgcggacgcccgc
gtgcgccgcgcccttgcgatggcttgcgacaaccaggtgctgctcgaactcggctatgcc
aaccgcggcacgctggccgaaaaccaccacgtctgcccgatccacccagagtatgccgac
atcggcgcaccgccctatgatcccgaaggcgcccgcgcgctgatggaagaggcgggcatg
gccgactatgtgcacgagctcatctcgatcgacgacgactggcgtcgcaacacgtcggat
gcgctcgccgcgcagctccgcgacgcgggcatccagtgtgagcgtacggtgtatccgggc
tcgaccttctggaacgactgggccaatttcgccttctcctcgaccgactggggccaccgc
ccgctcggcgtgcagatcatggcgctggcctaccgctccggcgtggcctggaacgagacg
ggtctcgcctcggaagagttcgactcgatgctggacgaggcctcggccatctccgacgcc
gcggcccgccgcgacgtgatggagcggatcgagaagttcctttgggaagacggcacgatc
atccagccctactggcgctcgctctaccgccacgcgcggccgggcgtgatcggtggcaac
agccacccgatcaacgagatccacgttcacacgctggcgctcgaaagctga
DBGET
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