Pelagovum pacificum: I8N54_11470
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Entry
I8N54_11470 CDS
T06971
Name
(GenBank) alanine racemase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ppaf
Pelagovum pacificum
Pathway
ppaf00300
Lysine biosynthesis
ppaf00470
D-Amino acid metabolism
ppaf01100
Metabolic pathways
ppaf01110
Biosynthesis of secondary metabolites
ppaf01120
Microbial metabolism in diverse environments
ppaf01230
Biosynthesis of amino acids
Module
ppaf_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ppaf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
I8N54_11470
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
I8N54_11470
Enzymes [BR:
ppaf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
I8N54_11470
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Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Ala_racemase_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
QQA41449
LinkDB
All DBs
Position
complement(2328371..2329837)
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AA seq
488 aa
AA seq
DB search
MTTPTRHCHGAVPLTARLEPWMQEAMSPDWLRRAVDTYGSPVNIHAVAPFQRNMARFVDV
AKSRGVQLTPYFARKANKCLSFVTSARDYGWGVDTASEAEVVQAIDAGVRGGRIVCTAAI
KQADMIDACIGHGAEIMLDNHDELALVAARARELGRRASVGLRLSGFEHEGRKLYSRFGF
PVSDLPELLDTLDQMPELSFGGVHFHLNGYDSAQRSSALVALLSHADRLRKSVGGSPYID
IGGGIPMSYLEQPDQLSTFLDAHDRALAGDAEPVTFHNQGLGRRDGGAPDAYPVAQSLVQ
DDWLASVLDTPAGTGTIAQALVSSGIRLRCEPGRSALDGCGLTAARVVHRKRDSEGNWMI
GLAMNRTQFRTGFQEVMVDPILIPTGADRQEEEMRGYLTGTYCTESEFLVLREMVFPAGV
AIGDIVVFPNTAGYLMHFLESRSHQFDLARNVVFAGADADPRPDGIDGAVPTSQSRTWQQ
RMPQQQLV
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgccgacccgccattgccacggggccgtcccgctcaccgcccggctggagccc
tggatgcaggaggccatgtccccggactggttgcgtcgcgcggtcgacacctacggctca
ccggtgaacatccatgccgtcgcaccgttccagcgcaacatggcgcggttcgtcgatgtc
gcgaagtcgcgcggcgtgcagctgacaccctatttcgcgcggaaggccaacaagtgcctg
tccttcgtcacctcggcccgcgactatggctggggcgtcgacacggccagcgaggcggaa
gtcgttcaggccatcgacgcgggtgtccgtggcggccggatcgtctgcaccgccgcgatc
aagcaggccgacatgatcgacgcctgtatcggccacggcgcggagatcatgctcgacaat
catgacgagctggccctggtcgcggcccgtgcgcgggagctcggtcgcagggcgtcggtc
ggccttcggctgtccgggttcgaacacgaggggcgaaagctctattcccggttcggcttt
ccggtgtcggacctgccggagctgctcgacaccctcgaccagatgcctgaactgtcgttc
ggtggcgtccattttcacctgaacgggtatgactcggcgcagcggtcctcggcgcttgtc
gcgctactctctcatgccgaccggctgcgcaaatccgttggcggctcgccctatatcgac
atcggcggcggtatcccgatgtcgtacctcgaacagcccgatcagctctccaccttcctc
gacgctcacgacagggcgcttgcgggcgacgcagagcccgtcaccttccataaccaaggg
ctgggccggcgcgacggtggcgcgcccgacgcctatcccgtcgcacagtcgcttgtgcag
gacgactggctcgcctcggtcctcgacacgccggcagggaccggcacgattgcccaggcc
ctcgtcagttccggcatccgcctgcgctgcgaacccggccgaagcgcgcttgacgggtgc
ggcctcacggcggcgcgcgtggtccatcgcaagcgggacagcgagggcaactggatgatc
ggtctcgcgatgaaccgcacccagttccgcaccggctttcaggaggtcatggtggacccg
atcctgatcccgaccggcgcggaccgtcaggaagaagagatgcgcggctacctcaccggc
acctattgcacggaatccgagttcctcgtcctccgcgagatggtgttccccgccggcgtc
gcgatcggcgatatcgtggtcttcccgaacacagccggctatctgatgcacttcctcgag
agccgctcgcaccagttcgacctcgcccgcaacgtggtcttcgcaggagccgacgccgac
ccgcgccccgatgggatcgacggggcggtgccgacctctcaatcgcggacatggcagcag
agaatgccgcagcaacagctggtctga
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