Pelagovum pacificum: I8N54_11930
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Entry
I8N54_11930 CDS
T06971
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ppaf
Pelagovum pacificum
Brite
KEGG Orthology (KO) [BR:
ppaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppaf03400
]
I8N54_11930
Enzymes [BR:
ppaf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
I8N54_11930
DNA repair and recombination proteins [BR:
ppaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
I8N54_11930
Prokaryotic type
I8N54_11930
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QQA41534
LinkDB
All DBs
Position
complement(2420601..2422022)
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AA seq
473 aa
AA seq
DB search
MSDTSPIIFWFRRDLRLGDHPGLTEAVKSGRPVIPVFLHDEVVEVTGAAPRWRLGLGVGA
FAETLSDKGSRLVLRRGKALEELRALVKETGAGAVWWSRLYDPDARQRDERVKAGLKDDG
IDARSFEGHLMFEPWTVETGQGEFYKVYTPYWKAVRGRDVAPTLSAPKELPAPDSWPKSD
KLEDWKMGAAMQRGAAVVEPYVCVGEDAASHRLGSFIANRVADYGEARDVPSVEGTSRLS
ENLTYGEISPRACWHAGVRAREEGKQGAETFLKELCWREFAYHLVHHTPRLTSDNWREEW
SAFPWNEDERKAEVKAWKQGRTGIDFVDAAMREMFVTGTMHNRGRMIVASYLTKHLMCHW
RIGKEWFEDCLIDWDPANNALGWQWSAGSGPDATPYFRVFNPETQAERFDKDGDYRKAWV
AEGQSSPPKTALAYFDAIPKSWGMSPDDPEPEPVVGVKEGRERALDAYQNRDF
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacacgtcccccatcatattctggttccgccgcgacctgcggcttggcgatcac
cccggcctgacggaggccgtgaagagtggccgtccggtcatccctgtcttcctgcatgac
gaggtcgtcgaggtgactggcgcggcaccgcgctggcggctcggcctcggtgtcggtgcg
tttgcggagacgctgtcggacaaaggctctcgccttgtcctgcggcgcggcaaggcgctg
gaggagctgagggcgctcgtgaaggagacgggcgccggcgcggtctggtggtcccggctc
tacgatcccgacgcccgccagagggacgagcgcgtgaaggccggcctcaaggacgacggc
atcgacgcacggtccttcgaggggcacctgatgttcgaaccctggactgtcgagaccggg
cagggtgagttctacaaggtctacacgccctattggaaagctgtgcgtggccgcgacgtg
gccccaaccctgtccgcaccgaaggagcttcccgcgccggacagctggccgaaatcggac
aagctcgaagactggaagatgggcgccgccatgcagcgcggcgccgctgtggtcgaaccc
tacgtctgcgtcggcgaagacgcggcgtcgcaccggctcggctccttcatcgccaaccgc
gtcgccgactacggcgaggcacgcgacgtcccctcggtcgagggcacgtcgcgcctgtcg
gaaaacctcacctacggagagatctctccgcgcgcatgctggcacgccggggtgcgggcg
cgggaagagggcaagcagggggcagagacgttcctgaaagagctctgctggcgcgagttc
gcgtaccatctggttcaccacacgccgcgtctgacctcggacaactggcgcgaggaatgg
tccgccttcccgtggaacgaggacgagcgcaaggccgaggtgaaggcctggaagcaaggt
cgcaccgggatcgatttcgtcgacgcggcaatgcgcgagatgttcgtcacaggcacgatg
cacaaccggggccggatgatcgtcgcttcctacctcaccaagcacctgatgtgtcactgg
cgcatcggcaaggaatggttcgaggattgcctgatcgactgggacccggcgaacaacgcg
ctgggctggcaatggtcggcgggctccggccccgatgcgacgccctatttccgggtcttc
aaccccgagacgcaggcggagcggttcgacaaggacggcgactaccgcaaggcgtgggtg
gcggaaggccagtcttctccgcccaagaccgcgctggcctatttcgacgccatcccgaag
agctgggggatgtcgcccgacgatcccgagccggagcccgtggtcggagtgaaggagggc
cgcgagcgtgcgctcgacgcctaccagaaccgggatttctga
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