Pelagovum pacificum: I8N54_12800
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Entry
I8N54_12800 CDS
T06971
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ppaf
Pelagovum pacificum
Brite
KEGG Orthology (KO) [BR:
ppaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppaf03016
]
I8N54_12800 (truA)
Enzymes [BR:
ppaf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
I8N54_12800 (truA)
Transfer RNA biogenesis [BR:
ppaf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
I8N54_12800 (truA)
Prokaryotic type
I8N54_12800 (truA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
QQA41687
LinkDB
All DBs
Position
2589704..2590477
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AA seq
257 aa
AA seq
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MPRYALKVEYDGGPFSGWQRQVDLPTVQGAIEAALARLEPRDHTIAAAGRTDAGVHAFGQ
VAHADMEKDWDPFRLSEALNFHLKPAPVAIIACAKVADDWHARFTAIERRYLFRLVARRA
PLTFEKGQVWQVGHPLDLAAMREGAAHLVGRHDFTTFRSSICQADSPVKTLDRFEIEEIT
RPDGFPEYRFRLRARSFLHNQVRSFVGTLERVGAGAWAPDRVAEALAAKDRAACGPVCPP
HGLYLAGVTYPHDPFGQ
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgccccgctacgcgctcaaggtggaatatgacggcggcccgttctcgggctggcagcgg
caggtcgacctgccgaccgtgcagggcgcgatcgaagccgcgctcgcccggctggagccg
cgcgaccacacgatcgccgccgcgggccggaccgatgccggggtgcatgccttcgggcag
gtggcccatgccgacatggaaaaggactgggacccgttccgcctgtcggaggcgctgaac
ttccacctcaagcccgcgccggtcgcgatcatcgcctgcgccaaggtcgccgacgactgg
cacgctcgcttcacggcgatcgaacggcgctacctgttccggctcgtggcccggcgcgcg
ccgctgaccttcgagaagggccaggtctggcaggtgggccatccgctcgacctcgccgcg
atgcgtgagggggcggcgcatctcgtcgggcggcacgacttcaccaccttccggtcgtcg
atctgccaggcggacagcccggtgaagacgctcgacaggttcgagatcgaggagatcacc
cgccccgacggcttcccggaataccgcttccgcctgcgcgcccggtcgttcctgcacaac
caggtccgcagcttcgtcggcacgctggagcgggtcggcgcgggggcctgggcgcccgac
cgcgtggccgaggcactcgcggcgaaggaccgcgcggcctgcgggccggtgtgcccgccg
catgggctgtatctcgccggtgtcacatatccgcacgatccgttcggccaatga
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