Pelagovum pacificum: I8N54_12810
Help
Entry
I8N54_12810 CDS
T06971
Name
(GenBank) translocation/assembly module TamB domain-containing protein
KO
K09800
translocation and assembly module TamB
Organism
ppaf
Pelagovum pacificum
Brite
KEGG Orthology (KO) [BR:
ppaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppaf02000
]
I8N54_12810
Transporters [BR:
ppaf02000
]
Other transporters
Pores ion channels [TC:
1
]
I8N54_12810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
QQA41689
LinkDB
All DBs
Position
2592378..2597702
Genome browser
AA seq
1774 aa
AA seq
DB search
MKTRVWNRAFALLALLLLPFQAVAQDEDDDVGYLTRLLQDNLSDVSRDVRIRGFEGALST
AASIESLSIADGEGVWLEAEGLVLDWNRSALLRGRVDVETLSAERIAILRAPIPDPNLDL
PPPEARVFSLPELPVSIEIGELLVEQIELGETLIGQPVEMRLEGAVSLIGGEATADIRAD
RTDGVEGSFVIAGDFSNDSRNLEISARVDEAPGGIVASTLDLPGDPSVSMLLEGNAPIDD
FSAELSIDTDGEERIAGSFALSTEREETDGDGPLPPATRAFSVDIGGDVTTLFAPDYREF
FGPDIRLAANGRLSPDGALDLPELSITAQSINIDGSLELGPGGWPERFALDGTLEGDGEQ
VLLPLGGPRTYVDRGEIYVAYDVETGDEWSGFALLEGFERPGLSLPSLSLFGDGVITQSE
GNALGDATANLNYSASGIVIDDLGVAEALGDTISGLANIRFDEGEPVEIEQITIEGDGLS
AEANATLELVGDLAVRFATVAEVADFGRFSTLAGTPLEGSGQIDVSGNYLALGGSFDIDL
TAETASLAIGNEMVDPLIGGDGTVRLVAERDLAGTRVETFSVSTDAVTATGDASLTSTVA
TIDLNAEISDLGLVSPQLAGPGTLDIALERDAELVTVFDGDLVAGTANLAIDGTAQSEEN
GYLTDFTVSGMVEDLASFADIAGQDLAGSAQLEVTGQVQPVDQLFDIDLAAETENLAIGI
EQVDPLIAGSGRLNVSAARDAAGITVDRLDLTTDEVTVTGTAQLGEAMRSADIDAELREV
ALVLDGLSGPATLSLTADQDNTGNVAVDLSATAPETSVSFDGTVAPPEQDYVTQGVLTAD
IATLAPFGDLVGRPLAGAVELSASGMVEPLTRFFDLDLQADTEDLAIGEERVDPLIGGTG
RLRADAKMDAESLLVRSFSLTTDAIEASGEGEFGDERRSARIDAALSDAGLVLPQLSGPA
NVSGTAEQDAQGNVDIDLTATAPSATVSVDAVVAPPEQNYRTEGTVSADITSLAPFSEIA
GRRLAGAIQLQASGMLEPINQYFDLEVAADTEDLAVGLGLVDPLIDGTGRLRANAARDAE
SLTVRSLELTTDQLDITAEGQLGDEVRTARIDARLNEAGILLNGISGPATLVGTADQDAA
GNVTVDFTATAPETRAEIDAVIAPPEENYRATGSLSATVGSLAPFSRLVGQQLRGSVALE
AEGSVAPLDAAFDLDVNARTSDLGIGIEAVDQLLRGPGNLNASVARGSDGALTVRALNVG
LPNLTVSGGATSGSNGDTVQFDARLADVGIFVPDLSGPVTASGTASRNGTVWTVDTDIDG
AGGVSSSISGQVSQNGNLALNANGSVNLELANNILAPRRLAGTANFNLSVNGPPSFNAIS
GTISSSGSTLSLPSFDNALEDIQANLSLGGGTGTLDVQAQVASGGSVSLTGPVTVTVPFN
GNLDLAINEVVLRDPQLYETTINGNLSVDGPISGGATVSGVAVLGRTEIQVPSSSVGALG
PLPEVRHVNTPGDVAATLNRADVSLDGTDRDDDAESDGGRDRPYPLDIRVEAPARIFVRG
RGLDAELGGELRITGTSDDILPVGRFDLIRGRLDILQQRFELSEGYAQLQGDFEPYLRLV
ASTEARDGTVVTITLEGPASDPDVSFTSSPELPQDEVLSRLLFGRDLASISPLQAVQLAA
AVGTLAGRGGGGLIGGVRNGLGLDDLDITTDDEGNAAVRAGVYLSENIYTDLTVNAEGET
EIDLNLDITDNVTARGTVGGDGETSLGIFYERDY
NT seq
5325 nt
NT seq
+upstream
nt +downstream
nt
ttgaagacacgtgtctggaatcgggcgtttgctctgctcgccctgcttctcctgccattt
caagctgttgcacaggatgaggacgacgacgtcggctacctgacccggctgttgcaggac
aacctgtccgacgtcagccgcgatgtccgcattcgcggcttcgaaggcgccctgagcacc
gccgcgtccatcgagtcgctgtccatcgccgacggcgaaggggtctggctggaggccgag
ggcctcgtgctcgactggaaccgctccgccctgctgcgcggccgcgtcgatgtcgaaacg
ctctcggccgaacggatcgccattctgcgcgcgccgatccccgacccgaacctcgacctg
ccgccgccggaagcgcgcgttttcagcctgccggaactgcccgtttcgatcgagatcggt
gagctgctggtcgagcagatcgagctcggcgagacgctgatcggccaaccggtcgagatg
cgcctcgagggggccgtgtcgctgatcggtggcgaagccaccgccgacatccgtgccgac
cgcaccgacggtgtcgaggggagctttgtcatcgccggcgatttctccaacgattcccgc
aacctcgagatttccgcgcgggtcgatgaggcccccggcggcatcgtggcaagcacgctg
gacctgcccggcgacccgtccgtttccatgctgcttgaaggcaatgcgccgatcgacgac
ttcagcgccgaactctccatcgacaccgatggggaagagcggatcgccggcagcttcgca
ctctccacggagcgggaggaaaccgacggcgacgggcccctgcccccggcgacccgcgcg
ttctcggtcgatatcggcggcgacgtcacgacgctcttcgcgcctgattaccgggagttc
ttcggccccgacatccgtctggccgcaaacggacgcctgtcgcccgacggcgcgctggac
ctgccggagctgtccattaccgcacagtcgatcaatatcgacggctcgctggagctcggc
cccggcggctggcccgaacggttcgcgctcgacgggacgctcgaaggtgacggcgaacag
gtgctgctgccgctcggcgggccgcgcacctacgtcgaccgtggcgagatttacgtggcc
tacgatgtcgagaccggcgacgaatggagcggcttcgccctgctcgaagggttcgagcgg
cctggcctctccctcccctcgctgtcgctgttcggcgacggtgtcatcacgcagtccgag
ggcaacgcgctcggcgatgcgacggcgaacctcaactattccgcctccggcatcgtgatc
gacgacctcggcgtcgcggaggcgctcggcgacacgatcagcggcctcgccaacatccgc
ttcgacgagggcgagccggtcgagatcgaacagatcacgatcgagggcgacggcctctcg
gcagaggcgaacgccacgctcgaactcgtcggcgatcttgccgtgcgcttcgccacggtc
gcggaagtcgctgatttcggacggttctccacgctcgccggcactccgctggagggcagt
ggccagatcgacgtgtcgggcaactacctcgccctcggcgggtcgttcgacatcgacctg
actgccgagaccgccagcctcgccatcggcaacgagatggttgacccgctgatcggcggc
gacggcaccgtgcgcctcgttgcggaacgcgacctcgccggcacccgggtggaaacgttt
tcggtcagcaccgatgcggtcacggcaacgggcgatgcctcgctcaccagcaccgtcgcg
acgatcgacctgaacgcggaaatcagcgacctcgggctcgtctcaccacagctcgccggg
ccgggaacgctcgatatcgcgctcgaacgcgatgcggagctcgtgaccgtgttcgacggc
gacctggtggccggcaccgcgaacctcgcgatcgacggcaccgcccagtcggaggagaac
ggctacctcaccgatttcaccgtcagcggcatggtcgaggacctcgccagcttcgccgat
atcgccggacaggatctggccggtagcgcacagctggaggttaccggacaggtgcagcct
gtcgatcagctgttcgatatcgatctcgcggccgagaccgagaacctcgccatcgggatc
gagcaggtcgatcctctcatcgccgggtcgggccgcctgaacgtcagcgcggcgcgcgac
gcggcggggatcaccgtggaccggctcgacctgacgaccgacgaggtcaccgtgaccggc
accgcccagcttggcgaggcgatgcgcagtgccgacatcgacgcggagcttcgcgaagtg
gcgcttgtgctcgacgggttgtcggggccggcgaccctgtcgctgaccgccgatcaggac
aacaccggaaacgttgccgtcgacctgtccgcaaccgcgccggagacgagcgtgtccttc
gacggcaccgtggcgccgcccgagcaggactatgtcacgcagggcgttctgaccgcggac
atcgcgacgctggcgccgttcggcgacctagtcggccggccgctggccggtgcggtggag
ctgagcgcatcaggcatggtcgaaccgctgacccggttcttcgatctggaccttcaggcc
gataccgaggacctcgccatcggggaagagcgggtcgatccgctgatcggcggcaccggc
cggctgcgggcggacgccaagatggatgccgaaagcctgctggtgcgcagcttctccctg
accaccgacgcgatcgaggcgtcgggcgaaggcgagttcggtgacgagcgccgctccgcc
cggatcgacgcggcgctgtccgatgccggactggtgttgccgcagctctcgggccccgca
aacgtttccggcacggccgaacaggatgcccaaggcaacgtcgacatcgacctgaccgcc
accgcgccgagcgcgaccgtctcggtcgatgccgtcgtcgcaccgccggagcagaactac
cgcaccgaaggcacggtgagcgccgatatcacctcgctcgcgcccttctcggagatcgcg
ggccggcggctcgccggtgcgatccagctccaggcgtcggggatgctcgagccgatcaac
cagtatttcgacctcgaagtggctgccgataccgaagacctcgctgtcggactgggcctt
gtcgatccgttgatcgacggcacgggccgcttgcgggccaacgcggcgcgggacgccgaa
agcctgactgtgcgcagcctcgagctgacgacggatcagctcgacatcaccgccgaaggg
cagcttggcgacgaggtgcggaccgcccgcatcgatgcgcggctgaacgaggcgggcatc
ctgctgaacggcatttccggtccggcgacgctcgtcgggacggcggatcaggacgcggcc
ggaaacgttacggtcgacttcaccgccaccgcgccggagacccgcgcagagatcgacgcg
gtgatcgcgccgccggaggagaactaccgcgcgacgggcagcctgtcggcgacggtcggt
tcactcgcaccgttttcgcggcttgtcggacagcagttgcgcgggtctgtcgcgctcgag
gcggagggcagcgtcgccccgctcgacgcggcattcgaccttgacgtcaacgcgcggacg
tccgacctcggcatcgggatcgaggcggtcgaccagcttctgcggggaccgggcaacctg
aacgccagtgtcgcgcggggcagtgacggggcactgaccgtgcgcgcgctgaacgtcggc
ctgccgaacctgacggtgtcgggcggagcgacatcgggcagcaacggcgacacggtgcaa
ttcgacgcccggcttgcggatgtcggcatcttcgtccccgacctgtcggggcccgtcacc
gcgagcggcacggcaagccggaacggcaccgtctggactgtcgacacggatatcgacggc
gcgggcggcgtgagctcgtccatttccggacaggtgtcgcagaacggcaatctcgcgctc
aatgcgaacgggtccgtgaacctcgaactggccaacaatatcctcgcgccgcgtcggctg
gcgggcacggcgaacttcaacctgtccgttaacggaccgccgtcgttcaacgcgatttcc
ggcacgatcagcagcagtggatccacgctctccctgccctctttcgacaatgcgctggag
gatatccaggcgaacctgtcgctgggtggcgggaccggcacgctcgacgtgcaggcgcag
gtggcgagcggcgggtcggtatcgctgaccgggccggttaccgtgactgtgccgttcaac
ggcaacctcgacctggccatcaacgaagtcgtgcttcgcgatccgcaactctacgagacc
acgatcaacggcaacctgtcggtcgacggtccgatttcgggcggtgcgacggtgtccggt
gtcgcggtgcttggccgcaccgagatccaggtgccgtcctcctcggtcggcgctctcgga
ccgctgcccgaagtcagacacgtgaacacgcccggcgacgtggcggcgacgctgaaccgg
gcggacgtctcgctcgacgggacggatcgggatgacgacgccgaaagcgacggcggtcgc
gaccgcccctacccgctcgacatccgggtggaggcaccggcgcggatcttcgtgcggggt
cgtggcctcgacgcggaactggggggtgagctccggatcaccggcacctcggacgacatc
ctgccggtgggccggttcgacctgatccgcggccggctcgacattctgcaacagcggttc
gagctgtcggagggttacgcgcagcttcagggcgatttcgaaccctacctgcgtctcgtc
gcctcgaccgaggcgcgggacggcacggtcgttaccatcacgctcgaagggccggcatcg
gacccggacgtgtcgttcacctcttcgccggagctgccgcaggatgaagtgctgtcgcgg
cttctgttcgggcgcgacctcgccagcatctcgcccctgcaggcggtgcagctcgcggcg
gcggtcggcacgctggccgggcgcggcggtggtggcctgatcggcggcgtgcgcaatgga
ctcggcctcgacgatctcgacatcacgacggatgacgagggcaacgcggctgtgcgggcg
ggtgtctacctgtcggagaacatctacaccgacctgaccgtgaatgccgagggcgagacc
gagatcgacctcaacctcgacatcaccgacaacgtcaccgcgcgcggcacggtgggcggc
gacggggagacctcgctcggcatcttctacgagcgcgactactag
DBGET
integrated database retrieval system
