Pelagovum pacificum: I8N54_13085
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Entry
I8N54_13085 CDS
T06971
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ppaf
Pelagovum pacificum
Pathway
ppaf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppaf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
I8N54_13085
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppaf02000
]
I8N54_13085
Transporters [BR:
ppaf02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
I8N54_13085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Gag_MA
Motif
Other DBs
NCBI-ProteinID:
QQA41741
LinkDB
All DBs
Position
2665759..2667288
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AA seq
509 aa
AA seq
DB search
MRKYALRGTAATLLALVAAGAVSAQESLVIGTDVDAGTLDPRLSRDTTAYRTNNLIYAGL
VHLTPSLEPVPDLAESWESPDPQTVVFKLREGLTFSDGSPLTAEDVVFTFSTITDPDFNA
PQRTLYEPIESVEAIDETTVQFNLSTPYAPLMSYLDMGIVPSDYEGDLATEPMGAGPMVL
DAWNRGSSLELSASDSYWAGAPEIEEVTIQIVGDNSARAQAFEAGDLDVIQSPLSPNDIQ
RLEADDRFGAEIMAGLGVTYLNFNVADPILSDPEMRQALAMLVDQDTIVNQIYQGVDEVA
TSIILPSSWAYDPSITQPGFDIEGAMTKLAELGWSDSDGDGILDQDGTPLSITLSTHSED
PNRIQATEYIQAVMQSAGVDAQIQISDWPSFSTGYVQQGEHQIALLGWLNLTDPDRLGYA
QLTTGGSQNWGGYSNEAVDAALEKGRTSTDQEARAAAYQEAASIIAEELPYYIISYQGYQ
MFYASDLPVEVTANPRGNFRGLIGMPETE
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaatatgcactccgcggaaccgccgcgacgctcctcgccctggtggcggccggt
gccgtctctgcccaggaaagccttgttatcgggacggatgtcgatgccggcacgctggac
ccccggctgtcgcgggacaccacggcctaccgcacgaacaacctgatctacgcgggtctc
gtgcacctgacgccctcgctcgagccggtgcccgatctcgccgagagctgggaaagcccc
gacccgcagaccgtggtcttcaagctgcgtgaaggtctgaccttctccgacggctcgccg
ctcacggccgaggacgtggtcttcaccttctcgacgatcaccgatcccgacttcaacgca
ccccagcgcacgctctacgaaccgatcgagagcgtcgaggcgatcgacgagaccacggtg
cagttcaacctgtcgaccccctacgccccgctgatgagctatctcgacatgggcatcgtt
ccttccgactacgaaggcgacctcgcgacggagccgatgggcgcgggcccgatggtgctg
gacgcgtggaaccgcggcagctcgctcgaactgtcggcgtccgacagctactgggccggt
gcgcccgagatcgaagaggtgacgatccagatcgtcggcgacaactccgcccgcgcgcag
gcattcgaagccggcgacctcgacgtgatccagtcgcccctgtcgcccaacgacatccag
cggctcgaagcggacgaccgcttcggtgcggagatcatggccggcctcggcgtgacctat
ctgaacttcaacgtcgccgatccgatcctgtcggacccggagatgcgtcaggcgctcgcg
atgctggtcgaccaggacacgatcgtgaaccagatctaccagggcgtggacgaggtcgcg
acgtcgatcatcctgccgtcctcctgggcctacgatccctcgatcacgcagcccggcttc
gacatcgaaggcgcgatgaccaagctggcggaactcggctggtccgacagtgacggtgac
ggcatcctcgaccaggacggcacgccgctgtcgatcaccctgtcgacgcactccgaggac
ccgaaccggatccaggcgaccgaatatatccaggccgtgatgcagtccgccggggtcgac
gcccagatccagatctcggattggccatccttctccaccgggtatgtccagcagggcgag
caccagatcgcgctgctcggctggctgaacctgaccgacccggaccggctcggctacgcg
cagctgacgaccggcggctcccagaactggggcggctactccaacgaggcggtcgatgcc
gcgctcgagaagggccgcacgtcgaccgatcaggaggcccgcgccgccgcctaccaggag
gccgcgtcgatcatcgccgaggagctgccctactacatcatctcctaccaagggtatcag
atgttctacgccagcgacctgcccgtcgaagtgaccgccaacccgcgcggcaacttccgc
ggcctgatcggcatgcccgagacagagtaa
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