Pelagovum pacificum: I8N54_13165
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Entry
I8N54_13165 CDS
T06971
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ppaf
Pelagovum pacificum
Pathway
ppaf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppaf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
I8N54_13165
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppaf02000
]
I8N54_13165
Transporters [BR:
ppaf02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
I8N54_13165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
QQA41756
LinkDB
All DBs
Position
complement(2685875..2687761)
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AA seq
628 aa
AA seq
DB search
MDFKISRRGFLASGTAMAVGGLPTLSFAQDDLPPVEERLPENPLVVTPNERPGQQGGTWD
LALVGGGSLSMLFRYQAYDPLLRWNAEWSAAEPNVAESYEVSDDSTVYTFKLRRGHKWSD
GEPFTTEDVRFWFEDVFQDPDAGLPGQSHWYADGELATLEIDDEVTFRVVFPSPNGFFAT
KMADSNVDQLVRTPAHYLKQFHLKYNENANELAAERGFDSWIALFQREHGLNEDNVHFQN
SKRPTLNPWMFTSAPGEDTERAIAVRNPYYFKVDTEGTQLPYFDRINYQMVSDPEVLLLK
TLQGEIDVENIYINTPVNKPVLFDGQESGDYHFYTLKETAANVMVFQLNLNHTNEVKNEL
FNMRDFREAMSIAVDRQALIDAVFVGQGAPAQPSIREGDPLYNERLATQHTEYDPARANE
ILDGIVPEKDSEGYRLMSDGNRLTIIFEIDQVRTTFLDMFELALPMFREVGIDAQIRTMD
RSLWEERVRNGREFDATAHQFGANGGIAAMLDPRYFVPFNNNSIYAPGWALYFTDPENPA
AIEPPEEVKAQQQRLRDLLGTGDPERQNEIMGEILENAADQFLVFGVSLPPDGYGVVKNN
VVNMIDEMPNSFVWPTPMPVGTEQLFKE
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggatttcaagatcagcagacggggctttctggcctccggtaccgcgatggctgtcggc
ggacttccgacgctttctttcgcccaggacgatctgccgccggtcgaggagcgcctgccg
gagaacccgctcgtagtgaccccgaacgagcggcccggccagcagggcgggacgtgggat
ctcgcgcttgtcggcggcgggtcgctgtcgatgctgttccgctaccaggcctacgacccg
ctgctgcgctggaacgcggagtggagcgcggccgagccgaacgtcgccgaaagctacgaa
gtcagcgacgacagcacggtctacacgttcaagctgcgccgcggccacaagtggtccgat
ggtgaaccattcaccaccgaggacgtccgcttctggttcgaggacgtgttccaggatccg
gacgccggcctgcccgggcagtcgcactggtacgccgacggcgaactcgccacgctcgag
atcgacgacgaggtgaccttccgcgtggtgttcccctcgccgaatggcttcttcgccacc
aagatggccgactccaacgtcgatcagctggttcgcacgcctgcgcactacctcaagcag
ttccacctcaagtataacgagaacgccaacgaactggcggccgaacgaggcttcgacagc
tggatcgccctgttccagcgcgagcatggcctgaacgaggacaacgtccacttccagaac
agcaaacgtccgacgctgaacccgtggatgttcacctccgcccccggcgaggacaccgag
cgtgccatcgccgtgcgcaacccctactacttcaaggtcgacaccgagggcacgcagctg
ccgtacttcgaccggatcaactatcagatggtctccgaccccgaggtgctgctgctcaag
acgctgcagggcgagatcgacgtcgagaacatctacatcaacacgccggtcaacaagccg
gtgctcttcgacggtcaggaaagcggcgactatcacttctacacgctgaaggagacggcg
gcgaacgtgatggtgttccagctcaacctcaaccacacgaacgaggtgaagaacgagctg
ttcaacatgcgcgacttccgcgaggcgatgtcgatcgccgtcgaccggcaggcgctcatc
gacgccgtgttcgtcgggcagggcgccccggcgcagccgtcaatccgcgagggcgatccg
ctctacaacgaacggctggcgacgcagcacacggagtacgacccggcccgcgccaacgag
atcctcgacggcatcgtccccgagaaggacagcgaaggctaccgcctgatgagcgacggc
aaccgccttacgatcatcttcgagatcgaccaggtccggaccacgttcctcgacatgttc
gagctggcgctgccgatgttccgcgaagtcgggatcgacgcgcagatccgcaccatggac
cgctccctctgggaggaacgggtgcgcaacggccgcgagttcgacgccaccgcgcaccag
ttcggggccaacggcggcatcgcggcgatgctcgatccgcgctacttcgtgccgttcaac
aacaactcgatctacgcaccgggttgggcgctctacttcaccgatcccgagaacccggcc
gccatcgagccgccggaagaggtcaaggcacagcaacagcggctccgcgatctgctcggc
accggcgatccggagcggcagaacgagatcatgggcgagatcctcgagaacgcggccgac
cagttcctcgtgttcggtgtcagcctgccgcccgacggctacggcgtcgtgaagaacaac
gtggtcaacatgatcgacgagatgcccaacagcttcgtctggccgaccccgatgcctgtg
ggaacggagcagctcttcaaggagtga
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