Pelagovum pacificum: I8N54_13170
Help
Entry
I8N54_13170 CDS
T06971
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
ppaf
Pelagovum pacificum
Brite
KEGG Orthology (KO) [BR:
ppaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppaf03000
]
I8N54_13170
Transcription factors [BR:
ppaf03000
]
Prokaryotic type
Helix-turn-helix
LacI family
I8N54_13170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
LacI
Peripla_BP_1
Motif
Other DBs
NCBI-ProteinID:
QQA41757
LinkDB
All DBs
Position
2687952..2688956
Genome browser
AA seq
334 aa
AA seq
DB search
MSKVTLRIIAEKSGMSKYAVSRALSGKDGVSEATRQRIMEVADELGYERPTPPSQSEVVA
IFDDRDHVNAELHSQILAGLQREAGRLNYDLRSHWLHHGGSIEDVLRNAGAVFAINVSDE
TAKRAIEASGVPVVHSGWTGPLAQVDVVGGTDHGSGEAVVNHLHTLGHREIVYVHGTGDL
RGRRVRLSGARVAAEVTGTTIHDLSWEEDSSFSEAFTRLLRKNVRPTALFCAHDTLAMAV
VTDLLSRGWRIPQDVTIIGFGDFTPARLVSPPLTTVRVKGQEMGRTLARIMHLRTTDADW
PGVPLQIRVVNELIVRSTCGPPPTVHPLDREPRA
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagtcacgctgagaatcatcgccgaaaaaagtggcatgtcgaaatacgcggtg
tcccgcgcgctgtccggcaaggacggcgtcagcgaggccacccggcagcgcatcatggag
gtcgcggacgagctcggctacgagcgccccaccccgccaagccagagcgaggttgtcgcc
attttcgacgaccgcgaccacgtgaacgcggagctccacagccagatcctcgccgggctt
cagcgcgaggcgggccggctgaattacgatctgcgcagccactggctgcaccatggcggt
tcgatcgaggacgtgttgcgcaatgccggcgcggtcttcgcgatcaatgtgtccgacgag
acggcgaagcgggcgatcgaagcctccggcgtcccggtcgtgcattcggggtggaccggt
ccgctcgcacaggtcgacgtggtgggcggcaccgaccacgggtcgggcgaggccgtggtg
aaccatctgcacacgctcggccacagggaaatcgtctatgtccatggcacgggcgacctg
cggggccggcgggtccggctgtccggcgcgcgcgtcgcggccgaagtgacgggcaccacg
atccatgacctgtcctgggaggaggactcgtccttctcggaagcgttcacccggcttctg
cgcaagaacgtgcggccgaccgcgctattctgcgcgcatgacacgctcgccatggcggtg
gtcaccgacctgctgtcacggggctggcgaatcccgcaggacgtgacgatcatcggcttc
ggcgacttcacccccgcgcggctggtgagcccgccgctaaccaccgtacgggtgaagggc
caggagatgggtcgcacgctcgcccgcatcatgcatctgcgcaccacagacgccgactgg
cccggcgtgccgctccagatccgcgtggtgaacgaactgatcgtgcggagcacctgcgga
ccgccgcccacggtgcatccgctcgaccgggaaccgcgcgcctag
DBGET
integrated database retrieval system
