KEGG   Pelagovum pacificum: I8N54_13470
Entry
I8N54_13470       CDS       T06971                                 
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
  KO
K03089  RNA polymerase sigma-32 factor
Organism
ppaf  Pelagovum pacificum
Brite
KEGG Orthology (KO) [BR:ppaf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ppaf03021]
    I8N54_13470 (rpoH)
Transcription machinery [BR:ppaf03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     I8N54_13470 (rpoH)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r1_2 HTH_11 DUF1378
Other DBs
NCBI-ProteinID: QQA41806
LinkDB
Position
complement(2755372..2756268)
AA seq 298 aa
MSTYANLPAPSPEQGLNRYLQEIRKFPMLEPEEEYMLAKRWVDHEDTEAAHKMVTSHLRL
AAKIAMGYRGYGLPQAEVISEANVGLMQAVKRFDPEKGFRLATYAMWWIRASIQEYILRS
WSLVKLGTTSAQKKLFFNLRKAKARIGALEDGDLRPENVQRIATDLGVTEDEVVSMNRRL
SGGDASLNAMIGSEGDSATQWQDWLEDDSANTASDYEEQDELTARRELLAEAMDVLNDRE
KDILVQRRLQDEVVTLEELSGQYDVSRERIRQIEVRAFEKLQKRMQELAKEKGMLAAV
NT seq 897 nt   +upstreamnt  +downstreamnt
atgtcgacatatgcaaatcttccggctccctcgccggaacagggcctgaaccgttacctt
caggaaatccggaagttcccgatgctggaaccggaagaggaatacatgctggccaagcgc
tgggtggaccatgaggacaccgaggcggcccacaagatggtgacgagccacctgcgcctc
gcggcgaagatcgcgatgggctatcgcggctacggcctcccccaggccgaggtcatctcg
gaagcgaacgtcggcctcatgcaggccgtgaaacgctttgatcccgagaagggcttccgc
ctcgccacctatgccatgtggtggatccgcgcctcgatccaggaatacatcctgcggtca
tggtcgctcgtaaagcttggcacgacgtcggcgcagaagaaacttttcttcaacctgcgc
aaggccaaggcccgcatcggcgcgctggaagatggcgacctgcggcccgagaacgtgcag
cgcatcgcgaccgacctcggcgtgaccgaggacgaggtggtctcgatgaaccgccgcctg
tccggtggcgatgcctccctgaacgccatgatcggcagcgaaggcgacagcgcgacgcag
tggcaggactggctcgaagacgacagtgccaacaccgcctccgactacgaagagcaggat
gagctgaccgcccgtcgtgaacttctggccgaggcgatggatgttctgaacgaccgcgag
aaggacatcctcgtgcagcgccgtctgcaggacgaggtcgtgacgctcgaggagctgtcg
ggccagtacgacgtcagccgcgaacggatccgccagatcgaggtgcgcgcgttcgagaag
ctgcagaaacggatgcaggagctcgccaaggaaaagggcatgctcgccgccgtctga

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