Pelagovum pacificum: I8N54_15285
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Entry
I8N54_15285 CDS
T06971
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
ppaf
Pelagovum pacificum
Brite
KEGG Orthology (KO) [BR:
ppaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppaf03021
]
I8N54_15285
Transcription machinery [BR:
ppaf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
I8N54_15285
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
DUF7518
Motif
Other DBs
NCBI-ProteinID:
QQA42144
LinkDB
All DBs
Position
complement(3128363..3129241)
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AA seq
292 aa
AA seq
DB search
MAVAAFSDQTMSRKAMQAELLDAETELSLAYAWRDHRDEQALHRLITAYMRLAISMAGKF
RRYGAPMNDLIQEASLGLMKAADKFDPDRGVRFSTYAVWWIKASIQDYVMRNWSMVRTGS
TSSQKSLFFNLRRVQARLEREAAASGQVVDRQELRRMIAAEVGVPLHDVEMMEGRLSGSD
YSLNAPQSSEEESREWIDALEDSGEQASQQVEHTHDTETLRQWLLTALTALNDRERFIVR
ERKLRDDPRTLESLGDELGLSKERVRQLEAAAFGKMRKMLETESREVMHFLG
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcgcagctttctcagatcagacgatgtcccgcaaggcgatgcaggccgaactg
ctggacgccgaaacggagctttccctcgcctacgcctggcgtgatcaccgtgacgaacag
gcgctccaccgcctgatcaccgcctacatgcggctcgcgatttcgatggccggcaagttc
cgccgctacggcgccccgatgaacgatctgatccaggaagcgtcgctcgggctgatgaag
gcggcggacaagttcgaccccgaccggggtgtccgcttctcgacgtacgcggtctggtgg
atcaaggcgtcgatccaggactacgtgatgcggaactggtcgatggttcggaccggctcc
acctcttcccagaaatcgctgttcttcaatctgcgccgtgtgcaggcccggctggagcgc
gaagccgccgcgagcggtcaggtcgtcgaccggcaggaactccgccgcatgatcgccgcg
gaagtcggtgtgccgctgcacgatgtagagatgatggaaggtcggctttccggctcggac
tactcgctcaacgccccgcaatcgagcgaggaagagagccgcgaatggatcgacgcgctc
gaggacagcggtgagcaggcgtcccagcaggtcgagcatacgcacgacaccgagacgctc
cgccagtggctgttgaccgcgctgaccgcgctcaacgaccgcgagcgcttcatcgtccgc
gagcgcaagctgcgcgacgatccccgcacgctcgagtcgctcggtgacgagcttggcctg
tcgaaagagcgcgtgcgccagctcgaggccgccgccttcggcaagatgcgcaagatgctc
gagacggaatcgcgcgaagtgatgcacttcctcggctga
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