Pelagovum pacificum: I8N54_16275
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Entry
I8N54_16275 CDS
T06971
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
ppaf
Pelagovum pacificum
Pathway
ppaf03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
ppaf00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
I8N54_16275 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
ppaf03011
]
I8N54_16275 (rpsA)
Ribosome [BR:
ppaf03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
I8N54_16275 (rpsA)
Bacteria
I8N54_16275 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
RNase_II_C_S1
S1_2
OB_cyt-4
OB_RRP5_4th
DUF3592
Motif
Other DBs
NCBI-ProteinID:
QQA42329
LinkDB
All DBs
Position
complement(3317330..3319015)
Genome browser
AA seq
561 aa
AA seq
DB search
MAQNASMEEFEALLNESLEMDTPNEGSVVKGRVIAVEAGQAIIDVGYKMEGRVDLKEFAN
PGEAPEIGVGDEVEVYLRNVENARGEAVISREMARREEAWDRLEKAYADEERVEGAIFGR
VKGGFTVDLGGAVAFLPGSQVDVRPVRDAGPLMGLKQPFQILKMDRRRGNIVVSRRAILE
ESRAEQRAEVIGNLTEGQAVDGVVKNITEYGAFVDLGGVDGLLHVTDMAWRRVNHPSEIL
SIGETVKVQVIKINKETHRISLGMKQLQDDPWDTVTAKFPLGSVHQGRVTNITDYGAFVE
LEPGVEGLVHVSEMSWTKKNVHPGKIVSTSQEVDVMVLEIDEAKRRVSLGLKQTMRNPWE
VFAETHPEGTEVEGEVKNITEFGLFVGLDGDIDGMVHLSDLTWEGRGEDVIGDYRKGDMV
KAKVLEVDTEKERISLSIKALDSDPFAEAVGGVKRGSIITVTVTKIEDGGIEVEYEGMKS
FIRRSDLSRDRSEQRPERFQPGDHVDVRVTNVDQKTRRLGLSIKAREIAEEKEAVQQYGS
SDSGASLGDILGAALKGGDDE
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaaacgcatccatggaggaattcgaggccctccttaatgaaagcctcgaaatg
gacacgccgaacgaaggttcggttgtcaaaggccgtgtcatcgccgtcgaggcgggacaa
gccatcatcgacgtcggctacaagatggaaggccgcgttgatctgaaagaattcgcgaac
cccggcgaagcgcccgaaatcggcgttggcgacgaggtcgaagtctatctccgcaacgtc
gagaacgcccgtggcgaagccgtcatctcccgcgagatggcccgccgtgaagaggcgtgg
gaccgcctggagaaggcctatgccgacgaagagcgcgtcgaaggtgccatcttcggccgc
gtcaagggcggcttcaccgtcgacctcggcggcgccgtggcgttcctgcccggctcgcag
gtcgatgtgcgtcccgtccgggatgcgggcccgctcatgggtctcaagcagccgttccag
atcctcaagatggaccgccgccggggcaacatcgtcgtctcccgccgtgccatccttgaa
gagagccgtgccgaacagcgtgccgaagtcatcggcaacctcaccgaaggccaggcggtc
gacggcgtggtcaagaacatcaccgagtacggcgcgttcgtcgacctcggcggtgtggac
ggtctgctgcacgtcaccgacatggcatggcgtcgcgtgaaccacccctccgagatcctg
tcgatcggcgagaccgtgaaggtccaggtcatcaagatcaacaaggagacccatcgtatc
tccctcggcatgaagcagctgcaggacgatccgtgggatacggtgaccgcgaagttcccg
ctgggctccgtgcatcagggccgcgtgaccaacatcaccgactacggtgcgttcgtcgaa
ctggagccgggtgtcgaaggtctcgtccacgtgtccgagatgtcctggaccaagaagaac
gttcaccccggcaagatcgtctccacctcgcaagaggtcgacgtcatggtgctggagatc
gacgaagccaagcgacgcgtttcgctgggtctcaagcagaccatgcgcaacccgtgggaa
gtcttcgccgagacccatccggaaggcaccgaggtcgagggcgaggtcaagaacatcacc
gagttcggtctgttcgttggtctcgacggcgacatcgacggcatggttcacctctccgac
ctgacctgggaaggtcgtggcgaggacgtgatcggcgactatcgcaagggtgacatggtc
aaggccaaggtcctcgaggtcgacaccgagaaggagcgcatctcgctctccatcaaggcg
ctcgacagcgatccgttcgcggaagccgtcggcggcgtgaagcgcggctcgatcatcacc
gtcacggtcaccaagatcgaggacggcggcatcgaggtcgagtatgagggcatgaagtcc
ttcatccgtcgctccgacctgtcgcgtgaccgctccgagcagcgccccgagcgcttccag
ccgggcgaccacgtcgatgttcgcgtcaccaacgtggaccagaagacccgtcgcctcggc
ctgtcgatcaaggcccgcgagatcgccgaagagaaggaagccgtgcagcagtacgggtcg
tccgactccggtgcgtcgctcggcgacattctcggcgcagccctgaagggcggcgacgac
gaataa
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