Pelagovum pacificum: I8N54_16345
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Entry
I8N54_16345 CDS
T06971
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ppaf
Pelagovum pacificum
Pathway
ppaf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I8N54_16345 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppaf03019
]
I8N54_16345 (groL)
03110 Chaperones and folding catalysts [BR:
ppaf03110
]
I8N54_16345 (groL)
03029 Mitochondrial biogenesis [BR:
ppaf03029
]
I8N54_16345 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppaf04147
]
I8N54_16345 (groL)
Enzymes [BR:
ppaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
I8N54_16345 (groL)
Messenger RNA biogenesis [BR:
ppaf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
I8N54_16345 (groL)
Chaperones and folding catalysts [BR:
ppaf03110
]
Heat shock proteins
HSP60 / Chaperonin
I8N54_16345 (groL)
Mitochondrial biogenesis [BR:
ppaf03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
I8N54_16345 (groL)
Exosome [BR:
ppaf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
I8N54_16345 (groL)
Exosomal proteins of other body fluids (saliva and urine)
I8N54_16345 (groL)
Exosomal proteins of breast cancer cells
I8N54_16345 (groL)
Exosomal proteins of colorectal cancer cells
I8N54_16345 (groL)
Exosomal proteins of bladder cancer cells
I8N54_16345 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Knl1_RWD_C
cwf21
Motif
Other DBs
NCBI-ProteinID:
QQA42342
LinkDB
All DBs
Position
complement(3333726..3335369)
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKDVRFETDARNRMLKGVNILADAVKVTLGPKGRNVVIEKSFGAPRITKDGVSVAKEI
ELEDKFENMGAQMVKEVASRTNDEAGDGTTTATVLAQAIVKDGLKAVAAGMNPMDLKRGI
DMATSKVVQAIKDAARTVENSDEVAQVGTISANGEAEIGRQIADAMQKVGNEGVITVEEN
KGLETETDVVEGMQFDRGYLSPYFVTNSDKMIAELDDCMILLHEKKLSSLQPLVPLLEQV
IQSQKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQV
ISEDLGMKLENVTMDMLGTAKTVNITKDETTIVDGHGEKAEIEARVSQIRTQIEETTSDY
DKEKLQERVAKLAGGVAVIRVGGMTEVEVKERKDRVDDALNATRAAVQEGIVVGGGVALV
QGAKALDGLTGANSDQDAGIAIVRRALEAPLRQIAENAGVDGSVVAGKIRESDDLKFGFN
AQTEEYGDMFKFGVIDPAKVVRTALEDAASVAGLLVTTEAMIADKPQKEGAGGAPDMGGM
GGMGGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaggacgtacgtttcgaaaccgacgcccgcaaccgtatgctcaagggtgtc
aacatccttgccgacgcggtgaaagtgaccctcggcccgaaaggccgcaacgtggtcatc
gagaaatccttcggtgccccgcgcatcacgaaggacggtgtttcggtcgccaaggaaatc
gaactggaagacaagttcgagaacatgggcgcccagatggtgaaggaagtcgcttcccgc
accaacgacgaagccggtgacggcaccacgaccgccacggttctcgcccaggcgatcgtc
aaggacggcctgaaagccgttgccgccggcatgaacccgatggacctcaagcgcggcatc
gacatggcgacctccaaggtcgttcaggccatcaaggacgctgcccgcaccgtcgagaac
tccgacgaagtcgcgcaggtcggcaccatctccgccaacggcgaagccgaaatcggccgt
cagatcgccgacgcgatgcagaaagtcggcaacgaaggtgtcatcaccgtcgaagagaac
aaaggtctcgagaccgagaccgatgtcgtcgaaggcatgcagttcgaccgcggctacctg
tccccctacttcgtcacgaactcggacaagatgatcgccgagctcgatgactgcatgatc
ctcctgcacgagaagaaactctcctcgctgcagccgctcgttccgctgctcgagcaggtc
atccagtcccagaagccgcttctgatcatcgcggaagacgtcgaaggcgaagctctcgcc
acgctcgtcgtcaacaagctgcgtggtggcctcaagatcgctgccgtcaaggctccgggc
ttcggtgaccgccgcaaggccatgctgcaggacatcgcgatcctgaccggcggccaggtg
atctcggaagacctcggcatgaagctcgagaatgtcacgatggacatgctcggcaccgcc
aagacggtcaacatcaccaaggacgagaccacgatcgtcgacggtcacggcgagaaggcc
gagatcgaagcccgcgtcagccagatccgcacgcagatcgaggaaaccacctcggactac
gacaaggagaagctgcaggagcgcgtcgccaagctggccggcggtgttgccgtcatccgc
gtcggcggcatgaccgaagtcgaagtgaaagagcgcaaggaccgcgtcgatgacgcgctg
aacgccacccgtgctgccgttcaggaaggcatcgtggtcggcggcggcgtcgcgctcgtc
cagggtgcgaaggctctcgacggcctgaccggtgccaacagcgatcaggacgccggcatc
gccatcgtccgccgcgcgctggaagctccgctgcgccagatcgccgagaacgccggtgtc
gacggttccgtcgttgcgggcaagatccgcgaaagcgacgacctgaagttcggcttcaac
gcccagaccgaagaatatggcgacatgttcaagttcggtgtcatcgaccccgccaaggtg
gtccgcaccgctctcgaggacgctgcctcggttgccggcctgctggtcaccaccgaagcg
atgatcgccgacaagccgcagaaagagggtgccggtggcgcccccgacatgggcggcatg
ggcggcatgggcggcatgatgtaa
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