Pelagovum pacificum: I8N54_16395
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Entry
I8N54_16395 CDS
T06971
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
ppaf
Pelagovum pacificum
Pathway
ppaf00550
Peptidoglycan biosynthesis
ppaf01100
Metabolic pathways
ppaf01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ppaf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
I8N54_16395 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
I8N54_16395 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppaf01011
]
I8N54_16395 (mrdA)
Enzymes [BR:
ppaf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
I8N54_16395 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
ppaf01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
I8N54_16395 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QQA42352
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All DBs
Position
3345776..3347719
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AA seq
647 aa
AA seq
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MKRPTKDIQRSARTVTRRGLVLGAAQLGLMSVLGWRMHSMQVDQADEFRLLAEENRVNLR
LVPPARGLIFDRNGQKLAENEQNYRIVIVREDAGDVDEALARLARIIPLEQDAIDRAKEE
MARRSPFVPVTIMERVPWEDVARVTVNTPALPGISAEVGLSRFYGRGGDMAHVVGYVGPV
SDYDLTRGYLAEDEDPLLEIPRFQVGKTGVEARLEHTLRGTAGTKRIEVNAVGRVMRELG
RQDGDKGKDIQLTIDANLQEYLHARLDGESASAVVLDLEDGDIRAIGSTPSFDPNLFVRG
ISVADWSALNEDTYRPLASKAVQDAYPPGSTFKMVTALAALEAGEIDTEETVYCPGHLDV
SDVRFHCWRRGGHGNINLHESLKQSCDVYYYDVGQRVGIDKIAEMAKKLGLGMRHEIPMS
AVTEGIAPNKEWKRGFNGEEWRIGDTVNASIGQGYVLTSPVQLAVMVGRIATGRALTPRL
IRTIDGVPQPSGAGEPLGLNENNLRRVRESMNAVVNHSRGTAYSSRILADEFQMSGKTGT
SQVRRITAEERAAGVTSNADLPWERRDHGLFVCFAPANNPKYAVAVVVEHGGGGGAASPL
ARDIMLQALYNGTPPLEAYPSAVRGRIHEQQEQMEQRAAARNGNDRA
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtccgacgaaggatattcagcgcagcgcgcgcaccgtaacccgccggggtctc
gtcctcggcgcggcacagctcggcctgatgagtgtgctgggctggcggatgcattcgatg
caggtggatcaggcggacgaattccggctgctcgccgaggaaaaccgggtgaacctgcgc
ctcgttccgccggcccgcggcctgatcttcgatcgcaacggtcagaagctggcagagaac
gagcagaactatcgcatcgtcatcgtccgcgaggatgccggcgacgtggatgaggcgctc
gcccggctcgcccggatcatcccgctggagcaggatgccatcgaccgcgctaaagaagag
atggcccgccgctcgcccttcgttccggtgaccatcatggaacgcgttccgtgggaagac
gtggcccgtgtcaccgtcaacacccctgccctgcccggcatcagtgccgaggtcggcctg
tcgcgcttctacgggcgcggcggcgacatggcgcatgtggtgggctacgtcggcccggta
tcggactacgacctgacgcgcggctaccttgccgaggacgaggatccgctgctcgagatc
ccgcgcttccaggtcggcaagaccggcgtcgaggccagactcgagcatacgttgcgcggc
accgccggcaccaagcggatcgaggtgaacgccgtcggccgcgtgatgcgcgagctgggc
cgtcaggacggcgacaagggcaaggacatccagctcaccatcgacgcgaacctgcaggaa
tacctgcacgcgcggctcgacggtgaaagcgcgagcgccgtcgtgctcgacctcgaggac
ggcgacatccgggcgatcggctcgaccccgtcgttcgatccgaacctgttcgtgcgcggc
atctccgtcgccgactggtccgcgctgaacgaggatacgtaccgccctctcgcctccaag
gcggtgcaggacgcctatccgcccgggtccaccttcaagatggtcaccgcgctcgccgcc
ctcgaagcgggcgagatcgataccgaggagacggtctactgccccgggcacctcgacgtc
agcgacgtgcgcttccactgctggcggcgcggcgggcacggcaacatcaacctccacgag
agcctgaagcaatcctgcgacgtctattactacgatgtcggccagcgggtcggcatcgac
aagatcgcggagatggcgaagaagctcggcctcggcatgcgccacgagatcccgatgtcc
gccgtgaccgaggggatcgctccgaacaaggaatggaaacgcggcttcaacggtgaggaa
tggcggatcggcgacacggtcaacgcctccatcgggcagggctatgtcctgacctctccg
gtgcaactcgccgtcatggtcggccgcatcgcgacgggccgcgcacttaccccgcgcctg
atccgcaccatcgacggcgtgccgcaaccctcgggcgcgggtgaaccgctcggcctgaac
gagaacaacctccgccgcgttcgggagtcgatgaatgccgtcgtaaaccactcgcgcggg
acggcctacagcagccgcatcctcgccgacgagttccagatgtcgggcaagaccggcacc
agtcaggtccgccgcatcacggccgaagaacgcgccgccggggtcacgagcaacgccgac
ctgccgtgggagcgtcgggaccacgggctgttcgtctgcttcgccccggccaacaatccg
aaatacgccgtggccgttgtcgtcgaacacggcggcggtggtggcgcggcctcgccgctc
gcgcgggacatcatgcttcaggcgctctacaacggcacgccgccgctggaggcctacccc
tccgccgtgcgcggtcgcattcatgagcagcaggagcagatggaacagcgggccgccgcg
cgtaacggcaacgacagggcgtaa
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