Pelagovum pacificum: I8N54_16990
Help
Entry
I8N54_16990 CDS
T06971
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ppaf
Pelagovum pacificum
Pathway
ppaf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppaf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
I8N54_16990
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppaf02000
]
I8N54_16990
Transporters [BR:
ppaf02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
I8N54_16990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
UCR_Fe-S_N
Motif
Other DBs
NCBI-ProteinID:
QQA42463
LinkDB
All DBs
Position
3462291..3463925
Genome browser
AA seq
544 aa
AA seq
DB search
MTHKIKAGITRRTLLMSGAAAVGALSVGARPTQLMAQTPAAEQVLKVAHGGFDLDWSPMR
GGGRVLRWNSLWWASPMYFDENAQIQPYVVTEWTPNDDMTEWTFTLNPDAVFSDGSPITA
ADIKGSWELAAMPSTRHERVNQVLAGVVGYDEITGGETSTLEGVATPDDQTVVVTLGTPD
PIFFMRIANHLIPIVKASEARDENGEEVMEWFAPENGGITSGPFTMVELDVDGGSIAFEP
NPNFFIEAPKLTRVEIQVIEDTVTATNLIARGDMHAHTELVTSTIIQDLGPEFSAGPQIP
SGQHFWFNVNAAPFDDPMVREAAILAVDREGLIRASFPDGPHEMAEQILVGIDGVDPDWE
PYPYDPERARELLAESSYGGPERLPRLILAGTTTPAITAAAQFIVEQWRQNLGITAVELR
PSLDGFRPADVHIIRDDAGTRIPDAASFLNANISTEGNISKNKMNGYSNEEIDSLLDAAI
DMAVDNPDRIGNAREAQRIFRDEFGFIPWYYETMSRWARAEVEGMEKNLDWQVIRPWNIQ
IMES
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgacacacaagatcaaagccggcattacccggcgcaccctgctcatgagcggcgcggcc
gccgttggggcactatccgtcggcgcacgcccgacccaactaatggcgcaaacacctgcc
gcagagcaggttctaaaggtcgcccacggtggcttcgaccttgactggtcgccgatgcgt
ggcggcggtcgcgtgcttcgttggaactcactctggtgggcgagcccgatgtacttcgac
gaaaatgcgcaaatccagccgtacgtcgttacggagtggacgccgaacgacgacatgacc
gagtggaccttcaccctgaaccccgacgcggtgttctcggacggtagcccgatcacggct
gcggacatcaaggggtcgtgggaactggccgcgatgccttccacccgccacgaacgggtg
aatcaggtgctggccggcgtcgtcggctacgacgaaatcaccggaggcgagacctcgacg
cttgaaggtgttgccactcccgacgaccaaaccgtcgtcgtgacgcttggcacgcccgat
ccaatcttcttcatgcggatcgccaaccatttgatcccgatcgtgaaagcctcggaggcc
cgcgacgagaacggcgaagaagtcatggaatggttcgcccccgaaaacggtggcatcacc
tccggccccttcaccatggtggagctagacgtggacggcggctctatcgctttcgagccc
aacccgaacttcttcatcgaagctccgaagctgacccgcgtcgagatccaggtgatcgag
gacacggtgaccgcgaccaacctgatcgcgcgcggagacatgcatgctcacactgagctt
gtcacctcgaccatcatccaggacctcggacccgaattctcggccggcccgcagatcccg
tcagggcagcacttctggttcaacgtgaacgcggcgccgttcgatgacccgatggtgcgc
gaggcggcgatcctcgccgttgaccgcgagggcctgatccgggcctcgttccccgacggc
ccccacgagatggcggaacagatcctcgtcggaatcgacggtgtggaccccgattgggag
ccctatccctacgacccggaacgcgcccgcgaactgctggccgagtcgtcctacggcggc
cccgaacgcctgccccgcctcatcctcgccggcacgactacgcccgcgatcaccgccgcg
gcgcagttcatcgtggaacagtggaggcaaaacctcggcattacggccgtggaactgcga
ccctcactggacggcttccgaccggcggatgtccacatcatccgcgacgacgccggcacc
cggatcccggacgctgcctcgttcctgaatgccaacatctcgaccgaaggcaacatctcc
aagaacaagatgaacggctattcgaacgaggagatcgacagcctgctcgacgcggcaatc
gacatggcggtcgacaacccggaccggatcggcaatgcgcgggaagcgcaacgcatcttc
cgcgacgagttcggcttcattccgtggtactatgagacgatgtcccgctgggctcgtgcc
gaagtcgaggggatggagaagaacctcgattggcaggtcattcgcccctggaacatccag
atcatggaatcctga
DBGET
integrated database retrieval system
