Pelagovum pacificum: I8N54_17880
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Entry
I8N54_17880 CDS
T06971
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
ppaf
Pelagovum pacificum
Brite
KEGG Orthology (KO) [BR:
ppaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppaf02000
]
I8N54_17880
Transporters [BR:
ppaf02000
]
Other transporters
Pores ion channels [TC:
1
]
I8N54_17880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
DUF748
Motif
Other DBs
NCBI-ProteinID:
QQA45046
LinkDB
All DBs
Position
3632684..3633607
Genome browser
AA seq
307 aa
AA seq
DB search
MIRSLLIAGLLPVPAFCLSLDLPASAEMTLEEERPLDSTTIASGPFDGSVVPMADASGTV
SVQAWRLQAAGLTTLQILEPLAKQLEAEGFDALYTCESEACGGFDFRFALETLPPPAMHV
SLNDFRYLSARKGEDEYAALLVSRTSRAAYLQITSVTTGEPGEDAGLSAAPGAPLVPAEQ
VAPGSFGERLETAGHVTLGDLTFETGSAQLGEGTYESLAALAEYLESVPNRRVALVGHTD
SEGSLDGNIALSRRRAASVLERLATTYGIPRRQLEAHGMGYLAPVASNLTEEGREANRRV
EVIVLSE
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgatccgctccctgctcatcgccggactgttgccggttccggcgttctgcctgtcgctc
gacctgccggcctcggcagagatgacgctggaggaggagaggccgctcgattcgacaacc
atcgcatcggggccgttcgacgggtcggtcgttccgatggcggacgcgtcggggacggtg
tcggtgcaggcgtggcggctgcaggcggccgggctgacaacgctgcagatcctcgaaccg
ctggctaagcagctggaggcggaggggttcgacgcgctctacacctgtgaatccgaggcc
tgcggcgggttcgacttccgcttcgcgctcgagacactgccgccgccggcaatgcacgtc
agcctgaacgacttccgctacctgtccgcccgaaagggcgaggacgagtatgccgcgctt
ctcgtcagccggacgagtcgggccgcgtacttgcagatcacctccgtcacgaccggggag
ccgggcgaggatgcgggcctgagcgcggcaccgggcgcgccgctggtgccggcggagcag
gtcgcccccggcagtttcggggagcggctggagacggccgggcatgtcacgctcggcgat
cttacgttcgagacagggtcggcgcagcttggcgaggggacctacgagtcgctcgccgcg
ctcgcggagtatctggagagcgtgccgaaccgccgggtcgcgctggtcggacataccgac
agcgaagggtcgctcgacggcaacatcgcgctgtcgcggcggcgcgcggcgtcggtgctg
gagcggctggcgacaacctatggcatcccgcgccggcagctggaggcgcacgggatgggc
tacctcgccccggtcgcgtcgaacctgacggaagaggggcgtgaggccaatcgccgggtc
gaagtgatcgtcctgtcggagtga
DBGET
integrated database retrieval system
