Pelagovum pacificum: I8N54_17960
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Entry
I8N54_17960 CDS
T06971
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
ppaf
Pelagovum pacificum
Pathway
ppaf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I8N54_17960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppaf03019
]
I8N54_17960
Messenger RNA biogenesis [BR:
ppaf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
I8N54_17960
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Ortholog
Paralog
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GFIT
Motif
Pfam:
NUDIX
DUF2617
Motif
Other DBs
NCBI-ProteinID:
QQA42638
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All DBs
Position
3649341..3649823
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AA seq
160 aa
AA seq
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MTDQPVDESLYRPCVGVVLANRNGEVFVGQRIESDQPAWQMPQGGIDDGETALQAGLREL
WEETGVTADLVRIEAETEGWLIYDFPDDIAKTRWKGRFKGQRQKWLLARFTGEDDAVNIS
TAHPEFSEWKWVTPLQALEAIVPFKRDVYERMLREFDGRI
NT seq
483 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatcaacccgtcgacgaaagcctgtaccgcccgtgtgtcggggtcgttctggcc
aatcggaacggtgaggtgttcgtcggtcaacggatcgagtcggatcagccggcctggcag
atgccgcagggcggcatcgacgacggggagacggcgctccaggccgggcttcgcgaactg
tgggaggagacgggcgtgaccgccgacctcgtacggatcgaggcggagacggaaggctgg
ctgatttacgactttcccgacgacatcgccaagacccgatggaagggccgcttcaaggga
cagcggcagaagtggctgctcgcccggttcaccggcgaggatgacgcggtgaacatctcc
acggcgcatcccgagttctccgagtggaagtgggtcacgccgcttcaggcgctcgaagcg
atcgtgcccttcaagcgcgacgtctacgagcggatgctgcgggagttcgacggccgcatc
tga
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