Pelagovum pacificum: I8N54_19370
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Entry
I8N54_19370 CDS
T06971
Symbol
nusA
Name
(GenBank) transcription termination/antitermination protein NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
ppaf
Pelagovum pacificum
Brite
KEGG Orthology (KO) [BR:
ppaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppaf03021
]
I8N54_19370 (nusA)
03009 Ribosome biogenesis [BR:
ppaf03009
]
I8N54_19370 (nusA)
Transcription machinery [BR:
ppaf03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
I8N54_19370 (nusA)
Ribosome biogenesis [BR:
ppaf03009
]
Prokaryotic type
rRNA transcription factors
I8N54_19370 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
KH_2
KH_1
KH_NusA_C
KH_KhpA-B
S1
Motif
Other DBs
NCBI-ProteinID:
QQA42901
LinkDB
All DBs
Position
complement(3941531..3943150)
Genome browser
AA seq
539 aa
AA seq
DB search
MAITSANQLELLQTAEAVAREKMIDPSLVVEAMEESLARAAKSRYGAEMDIRVAIDRRTG
RATFTRVRTVVEDEELENYQAELTVEQAKQYLTDPVIGDTFVEEIPPVELGRIAAQSAKQ
VILQKVREAERDKQYEEFKDRAGTIINAQVKREEYGNVIVDVGAGEAVLRRNEKIGRESY
RPNDRIRCYIKDVRREQRGPQIFLSRTAPEFMAELFKMEVPEIYEGIIEIKAVARDPGSR
AKIAVISYDNSIDPVGACVGMRGSRVQAVVNELQGEKIDIIPWNEDVPTFLVNALQPAEV
TKVVLDEEAERIEVVVPEEQLSLAIGRRGQNVRLASQLTGLDIDIMTEEEESKRRQAEFE
ERTKLFMDTLDLDEFFAQLLVSEGFTNLEEVAYVEQDELLVIDGVDESTAAELQARARDY
LDEQNRVALEKARELGVEDSLVNFEGLSPQMVLALAEDGVKTLEDFATCADWELAGGWTT
VDGERVKDDGVLEKFDVSLEEAQDMVMTARVLLGWVDPDDLNPEVEEEDAEASEEEAEA
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcacatcggccaaccagcttgaactgttgcagaccgccgaggcagtcgcgcgc
gaaaagatgatcgacccgtcgctggtcgtggaggcgatggaagagtcgctcgcccgtgcc
gcgaagagccgctacggcgccgagatggacatccgtgtcgccatcgaccggcgcaccggc
cgtgcgaccttcacgcgcgtccgcaccgtggtcgaggacgaggagctggagaactaccag
gccgagctcaccgtcgagcaggccaagcagtatctgaccgatcctgtcatcggcgacacc
ttcgtcgaagagatcccgccggtcgaactgggccgcatcgccgcgcagtccgccaagcag
gtcatcctgcagaaggtccgcgaagccgagcgcgacaagcagtacgaagagttcaaggat
cgcgccggcacgatcatcaacgcccaggtcaagcgcgaggaatacggcaacgtcatcgtc
gacgtgggcgccggtgaagccgtgctgcgccggaacgagaagatcggccgtgaaagctat
cgcccgaacgatcgtatccgctgctacatcaaggacgtccgccgcgagcagcgcgggccg
cagatcttcctgagccgtaccgcgccggagttcatggccgagctgttcaagatggaagtc
cccgagatctacgagggcatcatcgaaatcaaggccgtcgcccgtgatccgggctcgcgc
gccaagatcgccgtgatctcctacgacaactcgatcgacccggtcggcgcctgcgtcggt
atgcgcggctcccgcgttcaggccgtcgtgaacgagctccagggcgagaagatcgacatc
atcccgtggaacgaggacgttccgacgttcctcgtcaacgcgctgcagcccgccgaggtg
acgaaggtcgttctcgacgaggaagccgaacggatcgaagtcgtcgttccggaagagcag
ctctccctcgccatcggccgtcgcggtcagaacgtgcggctggcctcccagctgaccggt
ctcgacatcgacatcatgaccgaagaggaagaatcgaagcgtcgccaggccgagttcgag
gagcgcaccaagctgttcatggacacgctggacctcgacgaattcttcgcccagctcctc
gtttccgaaggcttcaccaacctcgaagaagtcgcctacgtcgagcaggacgagcttctc
gtcatcgacggcgtggacgagagcacggcagccgaactccaggcccgtgcccgcgactac
ctcgacgagcagaaccgcgtcgcgctcgagaaagcgcgcgagcttggcgtcgaggacagc
ctcgtcaacttcgagggcctgtcgccgcagatggtgctggcccttgccgaggacggcgtg
aaaacgctcgaggacttcgcgacctgcgccgactgggaactggccggcggctggaccacg
gtcgacggtgagcgcgtgaaggacgacggcgtgctcgagaagttcgacgtctcgctggaa
gaggcgcaggacatggtgatgaccgcccgcgttctgctcggctgggttgatcccgacgac
ctgaaccccgaagtcgaggaagaggacgccgaggcgtccgaggaagaggcggaggcctga
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